Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6879

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6879: 15247 - KOG0293 WD40 repeat-containing protein, at 339326 to 341674 15247 mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342593 to 344205 15248

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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338,375 - -1.6
338,453 - -0.1
338,617 - -0.1
338,641 - 0.4
338,654 - -0.7
338,971 - -0.7
339,224 + 0.2
339,566 + 15247 mRNA_6879 0.10 -0.8
339,674 + 15247 mRNA_6879 0.15 0.1
339,816 - 15247 mRNA_6879 0.21 1.6
340,179 - 15247 mRNA_6879 0.36 -0.6
340,301 - 15247 mRNA_6879 0.42 -0.7
340,412 - 15247 mRNA_6879 0.46 0.6
340,830 - 15247 mRNA_6879 0.64 0.4
341,164 - 15247 mRNA_6879 0.78 -0.5
341,289 + 15247 mRNA_6879 0.84 0.2
341,413 - 15247 mRNA_6879 0.89 -0.1
341,444 + 0.2
341,596 + 1.1
341,607 - -1.3
341,730 - -0.3
341,741 + -0.1
341,752 - -0.6
341,756 + -0.0
341,904 + 0.1
342,053 + -0.4
342,058 + 0.7
342,188 - 0.5
342,188 - 0.1
342,195 + 0.2
342,198 - -0.9
342,211 + -1.3
342,233 + 0.3
342,347 + 1.5
342,347 + 0.5
342,357 - 0.1
342,361 - 0.2
342,371 + 0.2
342,508 - 0.9
342,533 + 0.1
342,636 - -1.9
342,660 + -1.0