Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6877

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6876: 15244 - Hypothetical Protein, at 331964 to 333369 15244 mRNA_6877: 15245 - KOG3912 Predicted integral membrane protein, at 333940 to 335664 15245 mRNA_6878: 15246 - Hypothetical Protein, at 336043 to 337941 15246

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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333,028 + 15244 mRNA_6876 0.76 -1.3
333,051 + 15244 mRNA_6876 0.77 0.2
333,326 - -0.6
333,326 + 1.3
333,456 - 0.5
333,470 - -2.9
333,530 - 0.5
333,626 + 1.1
333,627 - 1.8
333,639 + -1.3
333,646 - -0.4
333,648 + 0.7
333,650 + 0.6
333,660 + 0.4
333,791 - 0.2
333,961 + -0.1
334,080 - 0.8
334,095 - -0.5
334,188 - 15245 mRNA_6877 0.14 0.4
334,196 - 15245 mRNA_6877 0.15 -0.6
334,200 + 15245 mRNA_6877 0.15 -0.7
334,332 - 15245 mRNA_6877 0.23 1.0
334,640 + 15245 mRNA_6877 0.41 -0.2
334,658 + 15245 mRNA_6877 0.42 0.1
334,674 - 15245 mRNA_6877 0.43 -0.8
334,675 + 15245 mRNA_6877 0.43 -0.6
334,685 + 15245 mRNA_6877 0.43 -0.8
334,794 - 15245 mRNA_6877 0.50 0.5
334,815 + 15245 mRNA_6877 0.51 -0.4
334,953 - 15245 mRNA_6877 0.59 -0.2
335,206 - 15245 mRNA_6877 0.73 0.2
335,376 + 15245 mRNA_6877 0.83 -0.6
335,549 + -0.3
335,663 + 0.0
336,347 - 15246 mRNA_6878 0.16 -0.3
336,355 - 15246 mRNA_6878 0.16 1.4
336,367 - 15246 mRNA_6878 0.17 -0.3
336,511 + 15246 mRNA_6878 0.25 -0.2
336,532 + 15246 mRNA_6878 0.26 -0.1