Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6839

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6838: 15206 - K17656 MSS51 mitochondrial splicing suppressor protein 51, at 240941 to 242492 15206 mRNA_6839: 15207 - K17257 ITFG1 integrin alpha FG-GAP repeat containing protein 1, at 242700 to 245129 15207 mRNA_6840: 15208 - SUPERFAMILY--SSF81383, at 245238 to 247225 15208

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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242,589 - 1.0
242,595 + -0.0
242,611 + -1.1
242,701 + 0.7
242,701 + 0.4
242,725 - 1.4
242,725 - 0.5
242,728 + 0.5
242,928 - 0.7
243,055 + 15207 mRNA_6839 0.15 0.4
243,154 - 15207 mRNA_6839 0.19 0.6
244,063 + 15207 mRNA_6839 0.56 1.3
244,063 - 15207 mRNA_6839 0.56 0.4
244,228 + 15207 mRNA_6839 0.63 0.6
244,419 - 15207 mRNA_6839 0.71 0.8
244,481 - 15207 mRNA_6839 0.73 1.9
244,492 + 15207 mRNA_6839 0.74 0.7
244,504 + 15207 mRNA_6839 0.74 1.1
244,514 + 15207 mRNA_6839 0.75 0.8
244,514 + 15207 mRNA_6839 0.75 0.8
244,518 + 15207 mRNA_6839 0.75 -0.8
244,550 - 15207 mRNA_6839 0.76 1.0
244,645 - 15207 mRNA_6839 0.80 1.1
244,804 + 15207 mRNA_6839 0.87 -0.4
244,822 + 15207 mRNA_6839 0.87 0.3
244,904 - 0.5
245,060 + -2.7
245,105 + -0.1
245,364 - 0.8
245,434 - 0.4
245,778 + 15208 mRNA_6840 0.27 0.4
246,100 + 15208 mRNA_6840 0.43 -0.8