Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6810

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6809: 15177 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 191872 to 193044 15177 mRNA_6810: 15178 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 193397 to 194230 15178 mRNA_6811: 15179 - K03953 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9, at 194472 to 196083 15179

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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192,536 + 15177 mRNA_6809 0.57 0.1
192,686 - 15177 mRNA_6809 0.69 -0.3
192,690 - 15177 mRNA_6809 0.70 -1.1
192,964 + -0.1
192,992 + -0.9
193,102 - -0.3
193,578 + 15178 mRNA_6810 0.22 -0.1
193,584 + 15178 mRNA_6810 0.22 1.2
193,713 + 15178 mRNA_6810 0.38 0.3
193,719 + 15178 mRNA_6810 0.39 0.3
194,012 - 15178 mRNA_6810 0.74 -0.1
194,116 + 15178 mRNA_6810 0.86 0.3
194,117 - 15178 mRNA_6810 0.86 0.2
194,146 + 15178 mRNA_6810 0.90 -0.1
194,258 + -1.9
194,302 - -0.9
194,302 + -1.0
194,393 - -0.7
194,414 - -0.9
194,422 - 0.7
194,437 + 0.6
194,451 + -0.1
194,461 + 0.3