Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6751

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6750: 15118 - SUPERFAMILY--SSF47473, at 56227 to 57172 15118 mRNA_6751: 15119 - K10578 UBE2J1, NCUBE1, UBC6 ubiquitin-conjugating enzyme E2 J1, at 57250 to 58945 15119 mRNA_6752: 15120 - Hypothetical Protein, at 59165 to 59914 15120

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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56,257 - 0.1
56,312 + 0.7
56,430 + 15118 mRNA_6750 0.21 1.8
56,442 + 15118 mRNA_6750 0.23 0.1
56,445 - 15118 mRNA_6750 0.23 0.4
56,570 - 15118 mRNA_6750 0.36 1.4
56,576 - 15118 mRNA_6750 0.37 0.0
56,586 + 15118 mRNA_6750 0.38 1.3
56,588 + 15118 mRNA_6750 0.38 0.3
56,589 + 15118 mRNA_6750 0.38 0.0
56,606 + 15118 mRNA_6750 0.40 0.3
56,627 + 15118 mRNA_6750 0.42 -0.1
56,713 - 15118 mRNA_6750 0.51 -0.0
57,300 + -0.7
57,303 + 1.0
57,312 - 0.8
57,596 - 15119 mRNA_6751 0.20 -0.2
57,605 + 15119 mRNA_6751 0.21 -0.1
57,613 - 15119 mRNA_6751 0.21 0.6
57,617 + 15119 mRNA_6751 0.22 0.2
57,760 - 15119 mRNA_6751 0.30 0.2
57,763 + 15119 mRNA_6751 0.30 0.2
57,763 + 15119 mRNA_6751 0.30 0.3
57,767 - 15119 mRNA_6751 0.30 -0.8
57,896 - 15119 mRNA_6751 0.38 -0.1
58,173 - 15119 mRNA_6751 0.54 0.8
58,771 + 15119 mRNA_6751 0.90 -1.1
59,132 - 2.2
59,529 + 15120 mRNA_6752 0.49 -0.4
59,542 + 15120 mRNA_6752 0.50 0.9
59,655 - 15120 mRNA_6752 0.65 0.6
59,676 + 15120 mRNA_6752 0.68 -0.5
59,792 - 15120 mRNA_6752 0.84 0.5
59,814 - 15120 mRNA_6752 0.87 1.0
59,850 - 0.3
59,941 + 0.1