Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6672

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6671: 15039 - K08331 ATG13 autophagy-related protein 13, at 1410209 to 1413905 15039 mRNA_6672: 15040 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1414224 to 1415709 15040 mRNA_6673: 15041 - Hypothetical Protein, at 1416296 to 1417315 15041

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,413,300 - 15039 mRNA_6671 0.84 -0.7
1,413,612 + 0.8
1,413,729 + 0.2
1,413,845 - 0.7
1,414,037 + -0.6
1,414,040 - 0.5
1,415,097 + 15040 mRNA_6672 0.59 -0.0
1,415,184 - 15040 mRNA_6672 0.65 -0.5
1,415,434 + 15040 mRNA_6672 0.81 -2.0
1,415,612 - 2.1
1,415,649 + 0.2
1,415,661 + 0.4
1,415,860 - -0.1
1,415,885 - -0.4
1,415,932 - 0.2
1,415,978 + 0.3
1,415,979 + 1.4
1,416,136 + 0.8
1,416,139 - 0.2
1,416,146 + -1.4
1,416,192 - 0.2
1,416,336 + 0.5
1,416,336 + 0.9
1,416,345 + -0.8
1,416,466 - 15041 mRNA_6673 0.17 1.4
1,416,469 + 15041 mRNA_6673 0.17 -0.7
1,416,474 + 15041 mRNA_6673 0.17 0.4
1,416,624 + 15041 mRNA_6673 0.32 1.2
1,416,636 + 15041 mRNA_6673 0.33 -1.4
1,416,637 - 15041 mRNA_6673 0.33 0.5
1,416,637 - 15041 mRNA_6673 0.33 0.0
1,416,637 + 15041 mRNA_6673 0.33 -1.1
1,416,670 - 15041 mRNA_6673 0.37 -0.3