Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6640

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6639: 15007 - K00362 nirB nitrite reductase (NADH) large subunit, at 1317697 to 1321815 15007 mRNA_6640: 15008 - K10534 NR nitrate reductase (NAD(P)H), at 1322487 to 1325707 15008 mRNA_6641: 15009 - K11863 ATXN3, MJD Ataxin-3, at 1326359 to 1327984 15009

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,321,515 + -0.1
1,321,765 + 0.8
1,322,117 - 0.5
1,322,488 - 1.0
1,322,543 - -0.5
1,322,657 + 1.6
1,322,658 - -0.5
1,322,782 - 0.4
1,322,797 + 0.3
1,322,814 + 15008 mRNA_6640 0.10 0.3
1,322,819 - 15008 mRNA_6640 0.10 -0.2
1,322,958 - 15008 mRNA_6640 0.15 0.1
1,323,104 - 15008 mRNA_6640 0.19 -0.7
1,323,144 - 15008 mRNA_6640 0.20 -0.5
1,323,256 - 15008 mRNA_6640 0.24 0.1
1,323,366 + 15008 mRNA_6640 0.27 -0.1
1,323,403 - 15008 mRNA_6640 0.28 -1.6
1,323,406 + 15008 mRNA_6640 0.29 0.6
1,323,469 - 15008 mRNA_6640 0.30 0.3
1,323,564 + 15008 mRNA_6640 0.33 0.7
1,323,586 + 15008 mRNA_6640 0.34 0.4
1,323,849 - 15008 mRNA_6640 0.42 0.1
1,323,920 + 15008 mRNA_6640 0.44 0.4
1,324,261 - 15008 mRNA_6640 0.55 0.7
1,324,492 + 15008 mRNA_6640 0.62 0.0
1,324,584 - 15008 mRNA_6640 0.65 -0.1
1,324,912 + 15008 mRNA_6640 0.75 -0.6
1,325,085 - 15008 mRNA_6640 0.81 -0.6
1,325,090 + 15008 mRNA_6640 0.81 0.0
1,325,172 + 15008 mRNA_6640 0.83 -0.2
1,325,177 + 15008 mRNA_6640 0.84 0.5
1,325,193 - 15008 mRNA_6640 0.84 -0.1
1,325,380 - 15008 mRNA_6640 0.90 -0.9
1,325,445 + 0.6
1,325,469 - 0.2
1,325,606 - 1.9
1,325,636 - -0.3
1,325,652 - 0.6
1,325,918 - 0.6
1,325,920 + -0.7
1,325,939 + -0.1
1,325,949 - -0.2
1,326,098 + -0.5
1,326,119 - -0.1
1,326,227 - -0.6
1,326,255 + -0.6
1,326,518 - 0.9