Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6494

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6493: 14861 - K20301 TRAPPC2, TRS20 trafficking protein particle complex subunit 2, at 920025 to 920861 14861 mRNA_6494: 14862 - KOG2885 Uncharacterized conserved protein, at 921118 to 925522 14862 mRNA_6495: 14863 - Hypothetical Protein, at 925916 to 926829 14863

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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920,923 - 0.3
920,944 + -0.0
921,080 - 0.5
921,082 + 0.0
921,084 + 0.5
921,091 + -0.7
921,094 - -2.0
921,102 - 0.6
921,113 + 0.7
921,114 + -0.7
921,115 + 0.3
921,119 + -0.5
921,140 - 1.1
921,265 + 0.2
921,555 + -1.2
921,872 + 14862 mRNA_6494 0.17 0.4
921,995 + 14862 mRNA_6494 0.20 0.2
922,131 + 14862 mRNA_6494 0.23 0.2
922,133 + 14862 mRNA_6494 0.23 -0.3
922,416 + 14862 mRNA_6494 0.29 -0.0
922,526 - 14862 mRNA_6494 0.32 2.3
922,889 + 14862 mRNA_6494 0.40 0.8
922,895 + 14862 mRNA_6494 0.40 1.1
923,393 - 14862 mRNA_6494 0.52 0.1
923,462 - 14862 mRNA_6494 0.53 0.2
923,573 - 14862 mRNA_6494 0.56 0.0
923,580 - 14862 mRNA_6494 0.56 -0.5
923,591 - 14862 mRNA_6494 0.56 -3.0
923,593 + 14862 mRNA_6494 0.56 0.5
924,423 - 14862 mRNA_6494 0.75 0.1
925,486 + -0.1
925,607 - -1.8
925,897 + 1.6
925,941 + 1.5
926,068 - 14863 mRNA_6495 0.17 -0.2
926,081 - 14863 mRNA_6495 0.18 1.5
926,085 + 14863 mRNA_6495 0.18 0.1
926,181 - 14863 mRNA_6495 0.29 -0.1
926,357 - 14863 mRNA_6495 0.48 0.6
926,366 - 14863 mRNA_6495 0.49 0.3