Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6430

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6429: 14797 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 784165 to 784634 14797 mRNA_6430: 14798 - KOG3112 Uncharacterized conserved protein, at 785004 to 786145 14798 mRNA_6431: 14799 - Hypothetical Protein, at 786526 to 787659 14799

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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784,012 - -1.1
784,055 + -0.5
784,070 + 0.5
784,077 + 0.3
784,084 - -1.1
784,122 + 1.1
784,258 - 14797 mRNA_6429 0.20 -0.6
784,479 + 14797 mRNA_6429 0.67 0.6
784,808 - -0.5
784,827 - 0.2
784,827 + -0.9
784,924 + -0.1
784,941 - -0.3
784,968 + 1.4
784,972 - -0.3
784,976 + -0.2
784,980 + 0.2
785,096 + 0.1
785,100 - -0.1
785,101 + -0.1
785,103 + -0.2
785,113 - -0.7
785,124 - 14798 mRNA_6430 0.11 0.5
785,141 - 14798 mRNA_6430 0.12 1.2
785,358 - 14798 mRNA_6430 0.31 0.3
785,406 - 14798 mRNA_6430 0.35 0.2
785,406 - 14798 mRNA_6430 0.35 0.5
785,481 - 14798 mRNA_6430 0.42 -2.3
785,797 + 14798 mRNA_6430 0.69 -0.3
785,970 - 14798 mRNA_6430 0.85 -0.8
786,141 + -0.7
786,150 - 0.9
786,260 + -0.2
786,263 - 1.5
786,270 - 0.0
786,379 - 0.5
786,424 - -1.5
786,425 - 0.4
786,563 - -0.6
786,575 + 0.2
787,076 - 14799 mRNA_6431 0.49 -0.7