Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6412

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6411: 14779 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 746136 to 749829 14779 mRNA_6412: 14780 - HMMPfam-F-box-like-PF12937, at 750026 to 751228 14780 mRNA_6413: 14781 - K08490 STX5 syntaxin 5, at 751427 to 753086 14781

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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749,780 + 0.3
750,052 + 0.7
750,088 + 0.7
750,471 - 14780 mRNA_6412 0.37 -0.2
750,660 + 14780 mRNA_6412 0.53 0.1
751,093 - 14780 mRNA_6412 0.89 0.2
751,128 + -1.5
751,135 - -0.7
751,420 + 0.5