Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6314

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6313: 14681 - K10592 HUWE1, MULE, ARF-BP1 E3 ubiquitin-protein ligase HUWE1, at 512417 to 524941 14681 mRNA_6314: 14682 - K11426 SMYD SET and MYND domain-containing protein, at 525320 to 527665 14682 mRNA_6315: 14683 - K10609 CUL4 cullin 4, at 528215 to 531333 14683

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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525,074 - -0.6
525,399 - 0.4
525,820 - 14682 mRNA_6314 0.21 1.5
526,139 - 14682 mRNA_6314 0.35 0.4
526,314 - 14682 mRNA_6314 0.42 -0.3
526,458 + 14682 mRNA_6314 0.49 0.6
526,571 - 14682 mRNA_6314 0.53 -1.0
526,584 - 14682 mRNA_6314 0.54 -0.0
526,602 - 14682 mRNA_6314 0.55 2.2
526,740 - 14682 mRNA_6314 0.61 -0.3
527,356 - 14682 mRNA_6314 0.87 -0.2
527,625 + -0.0
527,897 + 0.3
527,902 + -0.2
527,902 - -0.4
527,930 + 0.6
527,943 - -0.6
528,014 + -0.9
528,048 - 0.1
528,227 + -0.2