Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6261

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383014 to 384624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385089 to 388417 14630

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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382,089 + -1.1
382,089 + -0.1
382,104 + -0.2
382,110 - -0.4
382,132 + 0.5
382,143 - 0.8
382,189 - -1.7
382,195 - 0.6
382,212 + -0.1
382,220 + 3.3
382,238 - 1.6
382,240 - 0.3
382,249 + -2.2
382,254 - 0.0
382,264 - 1.5
382,289 - -0.6
382,293 - 0.4
382,307 + 0.4
382,324 + -0.2
382,332 + -0.1
382,340 + -0.2
382,345 + -0.4
382,349 - 0.6
382,360 + 0.6
382,363 + 0.1
382,365 + 0.4
382,369 + 1.3
382,370 - -0.8
382,370 - -0.6
382,375 + 0.4
382,381 + 0.1
382,418 - 0.8
382,423 + 0.2
382,433 + 0.5
382,434 - -0.1
382,436 + -1.0
382,436 - -1.6
382,436 - 0.9
382,437 - -0.2
382,448 - 0.4
382,449 + 0.5
382,451 + -0.6
382,471 - 0.4
382,503 + -0.3
382,516 + -0.3
382,529 - 0.6
382,531 + -0.1
382,531 + -0.2
382,535 + -0.2
382,542 + 0.2
382,543 - -0.5
382,546 - 0.3
382,549 - 0.2
382,550 - 0.7
382,556 + -0.6
382,566 - -0.1
382,570 - 0.2
382,571 - 0.2
382,573 - -1.3
382,575 - -0.1
382,583 - 0.4
382,583 - -0.3
382,586 + 0.2
382,586 + -0.5
382,587 + 0.3
382,588 - 0.0
382,588 - -0.6
382,590 - 0.9
382,592 - -0.1
382,594 + -0.7
382,603 + 0.2
382,652 - -0.4
382,663 - -0.2
382,691 - 0.5
382,695 + 0.2
382,700 + 0.3
382,707 - 0.7
382,713 - -0.0
382,724 + 0.4
382,726 + 0.1
382,732 + 0.9
382,866 - 0.6
382,884 + 0.1
383,004 - -0.9
383,005 + 0.8
383,014 - 0.9
383,016 + 0.2
383,158 - -0.3
383,166 + -0.7
383,738 - 14629 mRNA_6261 0.45 -0.3
383,822 + 14629 mRNA_6261 0.50 0.2
383,893 - 14629 mRNA_6261 0.55 -0.1
383,903 + 14629 mRNA_6261 0.55 0.8
384,042 - 14629 mRNA_6261 0.64 -0.3
384,044 + 14629 mRNA_6261 0.64 -1.1
384,045 - 14629 mRNA_6261 0.64 1.5
384,188 + 14629 mRNA_6261 0.73 -3.0
384,494 - 0.6
384,502 - 0.4
384,654 - 0.2
384,686 - -0.1
384,779 - 0.5
384,801 - 0.9
384,803 - 0.3
384,812 + 0.1
384,823 - -0.4
384,848 - 0.3
384,850 - 0.2
384,867 + -1.1
384,877 - -1.2
384,883 - 1.5
384,893 - 0.7
384,894 - 0.1
384,897 + -0.1
384,897 + 0.0
384,899 + 0.4
384,900 + -1.0
384,905 - 1.4
384,933 + -1.5
384,934 - 0.2
384,934 - 0.1
384,939 + -2.0
384,940 - 0.1
384,940 - 0.3
384,946 + -0.3
384,955 + -0.2
384,964 - 0.6
384,976 + 1.5
384,983 - 0.2
384,993 - -0.1
385,074 - -0.3
385,079 - 0.1
385,080 + 0.5
385,087 - 1.6
385,091 + 0.3
385,092 - 0.9
385,186 + 0.2
385,217 + -0.5
385,257 - -0.4
385,276 + -1.6
385,297 - 0.5
385,329 - 0.6
385,332 + 0.3
385,363 - 0.1
385,389 - 2.2
385,394 - 0.3
385,401 - 0.8
385,558 + 14630 mRNA_6262 0.14 1.1