Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6241

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6241: 14609 - Hypothetical Protein, at 333735 to 334704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335352 to 337546 14610

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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332,817 - -0.8
332,910 - -1.3
333,145 + 0.2
333,148 - -0.3
333,174 + 0.3
333,260 + -0.8
333,304 - 0.4
333,305 + -0.0
333,315 + 0.0
333,342 - -0.7
333,344 - -1.2
333,354 - -0.1
333,356 + 0.7
333,436 - 0.6
333,469 - -2.7
333,495 + 0.5
333,508 + -0.5
333,557 + -0.9
333,565 + -0.1
333,573 - -0.2
333,578 - -0.2
333,580 - -2.2
333,584 - 0.1
333,590 - 0.3
333,592 - 0.4
333,594 - -1.9
333,600 - -0.5
333,602 + 0.1
333,604 + -0.4
333,606 + -0.5
333,607 + -0.2
333,613 - -0.4
333,619 - 0.2
333,623 - 1.0
333,629 + -0.9
333,629 + 1.6
333,629 + 0.7
333,633 - -0.6
333,643 - -0.1
333,646 + -0.2
333,771 - -0.2
333,772 - 1.4
333,782 - -0.3
333,800 + -0.0
333,808 - 0.6
333,951 - 14609 mRNA_6241 0.22 0.0
333,961 + 14609 mRNA_6241 0.23 0.4
333,963 + 14609 mRNA_6241 0.24 0.6
333,976 - 14609 mRNA_6241 0.25 -0.3
334,089 + 14609 mRNA_6241 0.36 -0.1
334,104 - 14609 mRNA_6241 0.38 0.5
334,114 + 14609 mRNA_6241 0.39 1.8
334,261 + 14609 mRNA_6241 0.54 -0.8
334,402 + 14609 mRNA_6241 0.69 -0.5
334,534 - 14609 mRNA_6241 0.82 0.4
334,682 + 0.2
334,682 - 0.5
334,705 + -1.2
334,938 + 0.2
335,105 - 0.2
335,214 + -0.2
335,268 - -2.2
335,289 - -0.2
335,292 + -1.1
335,384 + 1.0
335,432 - 1.5
335,433 + -0.9
335,494 + -0.6
335,574 - 14610 mRNA_6242 0.10 -0.5
335,597 + 14610 mRNA_6242 0.11 0.5