Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6183

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6182: 14550 - K06665 SSN6 glucose repression mediator protein, at 196153 to 199901 14550 mRNA_6183: 14551 - Hypothetical Protein, at 200560 to 201520 14551 mRNA_6184: 14552 - Hypothetical Protein, at 202342 to 203677 14552

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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199,673 + 1.5
199,684 + 0.4
199,806 - -0.3
199,819 - 0.4
199,820 - 0.6
199,856 + -0.3
199,937 - -0.9
199,956 + -0.2
199,971 + 0.3
199,987 + 0.4
199,998 + -0.6
200,004 + 0.3
200,104 - -0.7
200,110 - -0.5
200,115 - -0.1
200,119 - -0.6
200,121 - -0.2
200,121 - 0.0
200,122 + 0.4
200,131 - -0.1
200,139 + -0.2
200,140 - -0.9
200,141 + -0.8
200,147 - -1.3
200,151 + -0.8
200,164 + -0.9
200,171 - -1.1
200,245 + -0.4
200,249 - -0.2
200,259 - -0.1
200,266 - -0.9
200,267 + -0.2
200,269 - -1.1
200,272 - -0.6
200,274 - 0.6
200,274 + -0.5
200,276 - -0.3
200,276 - -0.3
200,279 + -0.3
200,281 + -0.6
200,290 + -1.7
200,292 - 0.2
200,292 + 0.9
200,294 - -1.2
200,294 + 0.3
200,294 + -0.3
200,296 + 2.5
200,298 + 0.4
200,301 + -1.1
200,304 + 0.6
200,307 + 0.1
200,310 + 0.7
200,315 + 0.9
200,318 + 0.7
200,340 + 0.3
200,342 + -0.7
200,377 + 0.5
200,389 - -0.4
200,390 + -0.2
200,393 - 0.4
200,403 - -2.6
200,406 + -1.4
200,415 + -0.8
200,498 - 0.3
200,549 + 1.1
200,555 + -0.5
200,558 - 0.3
200,560 - 0.5
200,563 - 1.0
200,570 - -0.3
200,574 - 0.3
200,574 - -0.3
200,589 + -0.1
200,590 - 1.4
200,598 + -0.3
200,599 - 0.7
200,601 + 1.3
200,602 - -0.2
200,602 + -1.0
200,603 - 1.0
200,603 - -1.4
200,604 - -0.2
200,609 - 1.1
200,616 - 0.3
200,619 + -1.1
200,622 + -0.8
200,626 - 0.6
200,629 + -2.0
200,632 + -0.6
200,633 + 0.0
200,634 - -0.7
200,638 + 0.1
200,639 + 0.2
200,641 - -0.5
200,643 + -0.1
200,643 + 0.9
200,644 + -0.3
200,652 + -1.0
200,737 + 14551 mRNA_6183 0.18 -0.1
200,755 - 14551 mRNA_6183 0.20 -1.4
200,757 + 14551 mRNA_6183 0.20 -1.1
200,760 - 14551 mRNA_6183 0.21 -0.7
200,761 + 14551 mRNA_6183 0.21 -0.3
200,761 + 14551 mRNA_6183 0.21 0.0
200,772 + 14551 mRNA_6183 0.22 0.0
200,781 + 14551 mRNA_6183 0.23 0.4
200,781 - 14551 mRNA_6183 0.23 -0.1
200,786 - 14551 mRNA_6183 0.24 0.5
200,788 + 14551 mRNA_6183 0.24 -2.2
200,798 - 14551 mRNA_6183 0.25 0.4
200,799 - 14551 mRNA_6183 0.25 0.2
200,799 + 14551 mRNA_6183 0.25 1.2
200,800 + 14551 mRNA_6183 0.25 -0.0
200,804 - 14551 mRNA_6183 0.25 -0.1
200,832 + 14551 mRNA_6183 0.28 0.5
200,943 - 14551 mRNA_6183 0.40 1.5
200,958 + 14551 mRNA_6183 0.41 -0.4
200,986 + 14551 mRNA_6183 0.44 0.1
201,033 + 14551 mRNA_6183 0.49 0.9
201,036 + 14551 mRNA_6183 0.50 1.1
201,042 + 14551 mRNA_6183 0.50 0.2
201,048 - 14551 mRNA_6183 0.51 0.9
201,053 + 14551 mRNA_6183 0.51 0.0
201,063 - 14551 mRNA_6183 0.52 0.2
201,068 - 14551 mRNA_6183 0.53 -0.7
201,070 + 14551 mRNA_6183 0.53 0.4
201,070 - 14551 mRNA_6183 0.53 0.5
201,077 - 14551 mRNA_6183 0.54 1.2
201,082 - 14551 mRNA_6183 0.54 0.1
201,086 + 14551 mRNA_6183 0.55 0.3
201,088 - 14551 mRNA_6183 0.55 -0.1
201,094 + 14551 mRNA_6183 0.56 -0.3
201,095 - 14551 mRNA_6183 0.56 -0.5
201,096 + 14551 mRNA_6183 0.56 1.2
201,110 - 14551 mRNA_6183 0.57 -1.3
201,128 - 14551 mRNA_6183 0.59 -1.5
201,139 - 14551 mRNA_6183 0.60 1.0
201,148 - 14551 mRNA_6183 0.61 0.3
201,157 + 14551 mRNA_6183 0.62 -1.4
201,159 - 14551 mRNA_6183 0.62 -0.1
201,161 - 14551 mRNA_6183 0.63 0.3
201,171 + 14551 mRNA_6183 0.64 0.1
201,183 + 14551 mRNA_6183 0.65 0.0
201,188 - 14551 mRNA_6183 0.65 0.3
201,189 + 14551 mRNA_6183 0.65 0.6
201,192 - 14551 mRNA_6183 0.66 0.1
201,200 - 14551 mRNA_6183 0.67 1.3
201,209 + 14551 mRNA_6183 0.68 -1.0
201,209 + 14551 mRNA_6183 0.68 -0.7
201,212 + 14551 mRNA_6183 0.68 0.4
201,213 + 14551 mRNA_6183 0.68 -0.0
201,219 + 14551 mRNA_6183 0.69 0.1
201,228 + 14551 mRNA_6183 0.70 -0.6
201,235 - 14551 mRNA_6183 0.70 0.1
201,243 + 14551 mRNA_6183 0.71 -1.5
201,264 + 14551 mRNA_6183 0.73 -0.1
201,292 - 14551 mRNA_6183 0.76 0.0
201,345 + 14551 mRNA_6183 0.82 0.4
201,366 - 14551 mRNA_6183 0.84 0.6
201,399 + 14551 mRNA_6183 0.87 0.8
201,422 + 14551 mRNA_6183 0.90 0.2
201,431 + -0.2
201,448 - -1.2
201,457 - -0.9
201,468 - 0.1
201,469 - -0.1
201,471 - 0.0
201,473 - 0.0
201,479 - 0.4
201,482 + -1.0
201,492 + -0.6
201,493 - -0.4
201,493 + 0.0
201,635 - 0.1
201,648 + -0.4
201,649 - 0.1
201,663 - -0.7
201,682 - 0.3
201,804 + 0.0
201,931 + 0.5
201,961 - -0.2
202,094 + 0.0
202,103 + -0.2