Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6106

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6106: 14474 - K08332 VAC8 vacuolar protein 8, at 223 to 3658 14474 mRNA_6107: 14475 - K14401 CPSF1, CFT1 cleavage and polyadenylation specificity factor subunit 1, at 3990 to 10005 14475

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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39 + -2.0
39 + -1.3
40 + 0.0
40 + 0.6
40 + -1.4
41 + -1.1
56 + -0.1
56 + 0.1
56 + 0.6
58 + 0.3
59 + 0.9
59 + -1.8
62 - 0.6
65 - 0.7
77 + 0.9
84 + 0.1
102 + -0.4
137 + 1.4
151 + -0.6
200 + 0.3
208 + -1.6
216 + 0.9
229 + 0.4
348 - -1.4
430 + 0.2
498 - -1.4
502 - -1.8
685 + 14474 mRNA_6106 0.13 -0.7
747 + 14474 mRNA_6106 0.15 -1.1
755 + 14474 mRNA_6106 0.15 -0.5
946 + 14474 mRNA_6106 0.21 -1.8
975 + 14474 mRNA_6106 0.22 -0.1
1,245 + 14474 mRNA_6106 0.30 -1.9
2,125 + 14474 mRNA_6106 0.55 0.4
2,839 - 14474 mRNA_6106 0.76 -1.1
3,125 - 14474 mRNA_6106 0.84 -1.2
3,248 - 14474 mRNA_6106 0.88 -0.8
3,570 + 0.9
3,665 + -0.7
3,692 + -1.5
3,706 + -0.9
3,726 + 1.2
3,820 + -0.0
3,853 + 0.9
3,859 + -0.7
3,909 - -0.7
3,929 - -1.7