Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6044

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6043: 14411 - Hypothetical Protein, at 1508719 to 1509973 14411 mRNA_6044: 14412 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1510436 to 1511474 14412 mRNA_6045: 14413 - SUPERFAMILY--SSF54928, at 1512060 to 1513119 14413

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,509,556 + 14411 mRNA_6043 0.67 1.8
1,509,575 + 14411 mRNA_6043 0.68 1.7
1,509,676 - 14411 mRNA_6043 0.76 -3.5
1,509,677 + 14411 mRNA_6043 0.76 -2.8
1,509,699 - 14411 mRNA_6043 0.78 -0.5
1,509,748 - 14411 mRNA_6043 0.82 -1.1
1,509,761 - 14411 mRNA_6043 0.83 -0.9
1,509,762 + 14411 mRNA_6043 0.83 -1.7
1,509,765 - 14411 mRNA_6043 0.83 -0.1
1,509,833 - 14411 mRNA_6043 0.89 -0.4
1,509,837 - 14411 mRNA_6043 0.89 0.3
1,509,845 + 14411 mRNA_6043 0.90 -1.1
1,509,850 + -0.5
1,509,900 - 0.4
1,509,909 + 0.9
1,510,121 - 1.3
1,510,121 - -0.4
1,510,250 + -0.2
1,510,276 - 0.1
1,510,283 + -0.3
1,510,429 + -0.8
1,510,435 + 0.8
1,510,708 + 14412 mRNA_6044 0.26 0.8
1,510,864 - 14412 mRNA_6044 0.41 0.4
1,510,869 + 14412 mRNA_6044 0.42 -1.5
1,510,869 + 14412 mRNA_6044 0.42 -0.9
1,511,005 - 14412 mRNA_6044 0.55 -1.8
1,511,018 - 14412 mRNA_6044 0.56 1.0
1,511,224 - 14412 mRNA_6044 0.76 -1.0
1,511,452 - -0.6
1,511,461 - 0.6
1,511,606 - 0.7
1,511,874 - 0.3