Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6031

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6030: 14398 - KOG4036 Uncharacterized conserved protein, at 1482702 to 1483838 14398 mRNA_6031: 14399 - KOG2890 Predicted membrane protein, at 1484173 to 1485684 14399 mRNA_6032: 14400 - Hypothetical Protein, at 1486205 to 1487772 14400

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,483,212 - 14398 mRNA_6030 0.45 0.2
1,483,340 + 14398 mRNA_6030 0.56 0.9
1,483,765 - -0.3
1,484,063 + -0.2
1,484,064 - -0.9
1,484,076 - -0.9
1,484,079 - 0.5
1,484,087 + -0.0
1,484,092 - 0.7
1,484,093 - -0.1
1,484,372 + 14399 mRNA_6031 0.13 -0.1
1,484,394 + 14399 mRNA_6031 0.15 1.1
1,484,488 - 14399 mRNA_6031 0.21 -0.6
1,484,732 - 14399 mRNA_6031 0.37 0.6
1,484,812 + 14399 mRNA_6031 0.42 -1.4
1,484,814 - 14399 mRNA_6031 0.42 -0.5
1,484,962 - 14399 mRNA_6031 0.52 0.7
1,485,019 - 14399 mRNA_6031 0.56 1.8
1,485,150 - 14399 mRNA_6031 0.65 -1.4
1,485,592 - 0.0
1,485,709 + 0.7
1,485,818 + -0.7
1,485,822 + -1.0
1,485,850 - -0.2
1,485,979 - -0.2
1,485,987 - -1.9
1,486,004 + 0.1
1,486,138 - -3.2
1,486,239 + 0.5
1,486,331 - -0.1
1,486,332 + -0.2
1,486,422 + 14400 mRNA_6032 0.14 -1.2
1,486,425 + 14400 mRNA_6032 0.14 -0.4
1,486,464 + 14400 mRNA_6032 0.17 0.1
1,486,477 - 14400 mRNA_6032 0.17 0.5
1,486,480 - 14400 mRNA_6032 0.18 0.6
1,486,541 + 14400 mRNA_6032 0.21 0.3
1,486,596 - 14400 mRNA_6032 0.25 -0.2