Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5997

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5996: 14364 - BLAST ran GTPase activating protein 1 [Capsaspora owcza..., at 1410820 to 1412089 14364 mRNA_5997: 14365 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1412411 to 1414490 14365 mRNA_5998: 14366 - Hypothetical Protein, at 1414983 to 1417635 14366

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,411,548 - 14364 mRNA_5996 0.57 0.0
1,411,557 + 14364 mRNA_5996 0.58 0.3
1,411,614 + 14364 mRNA_5996 0.63 0.1
1,411,622 - 14364 mRNA_5996 0.63 0.4
1,411,805 + 14364 mRNA_5996 0.78 -2.7
1,412,059 - 0.1
1,412,093 + 0.3
1,412,099 + -0.3
1,412,867 - 14365 mRNA_5997 0.22 0.2
1,412,937 + 14365 mRNA_5997 0.25 -0.9
1,412,969 - 14365 mRNA_5997 0.27 -0.2
1,412,983 - 14365 mRNA_5997 0.28 0.3
1,412,998 + 14365 mRNA_5997 0.28 0.7
1,413,017 + 14365 mRNA_5997 0.29 0.6
1,413,311 + 14365 mRNA_5997 0.43 1.0
1,413,450 + 14365 mRNA_5997 0.50 0.7
1,413,651 + 14365 mRNA_5997 0.60 0.7
1,413,842 - 14365 mRNA_5997 0.69 1.3
1,413,873 - 14365 mRNA_5997 0.70 -1.1
1,414,205 - 14365 mRNA_5997 0.86 -0.2
1,414,219 - 14365 mRNA_5997 0.87 0.5
1,414,278 + 14365 mRNA_5997 0.90 0.0
1,414,519 - -0.9
1,414,803 - -0.1
1,414,854 + 0.8
1,414,862 - -0.6
1,414,969 - 0.3
1,415,241 - -0.8
1,415,285 - 14366 mRNA_5998 0.11 0.3
1,415,334 + 14366 mRNA_5998 0.13 0.0
1,415,355 - 14366 mRNA_5998 0.14 -0.3
1,415,450 + 14366 mRNA_5998 0.18 -3.7