Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5971

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5970: 14338 - Hypothetical Protein, at 1352279 to 1353458 14338 mRNA_5971: 14339 - Hypothetical Protein, at 1353644 to 1354802 14339 mRNA_5972: 14340 - K03243 EIF5B translation initiation factor 5B, at 1355069 to 1359492 14340

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,352,657 - 14338 mRNA_5970 0.32 -0.6
1,352,660 + 14338 mRNA_5970 0.32 -0.1
1,352,682 - 14338 mRNA_5970 0.34 -2.7
1,352,685 + 14338 mRNA_5970 0.34 -0.3
1,352,813 + 14338 mRNA_5970 0.45 -0.3
1,352,814 + 14338 mRNA_5970 0.45 1.8
1,352,822 + 14338 mRNA_5970 0.46 0.4
1,352,917 + 14338 mRNA_5970 0.54 0.4
1,352,961 + 14338 mRNA_5970 0.58 0.2
1,352,977 - 14338 mRNA_5970 0.59 0.7
1,353,001 + 14338 mRNA_5970 0.61 0.0
1,353,423 - -2.2
1,353,425 + -0.3
1,353,454 - 0.7
1,353,563 - 0.3
1,353,566 - 0.2
1,353,707 - -0.1
1,354,014 + 14339 mRNA_5971 0.32 -0.3
1,354,014 - 14339 mRNA_5971 0.32 0.2
1,354,016 + 14339 mRNA_5971 0.32 -0.9
1,354,020 + 14339 mRNA_5971 0.32 0.4
1,354,020 + 14339 mRNA_5971 0.32 -0.4
1,354,028 - 14339 mRNA_5971 0.33 -0.2
1,354,056 - 14339 mRNA_5971 0.36 -0.8
1,354,176 + 14339 mRNA_5971 0.46 0.2
1,354,281 - 14339 mRNA_5971 0.55 0.2
1,354,282 + 14339 mRNA_5971 0.55 1.1
1,354,291 + 14339 mRNA_5971 0.56 0.0
1,354,292 + 14339 mRNA_5971 0.56 0.3
1,354,447 + 14339 mRNA_5971 0.69 -0.2
1,354,455 - 14339 mRNA_5971 0.70 0.1
1,354,634 + 14339 mRNA_5971 0.85 0.8
1,354,713 + 0.2
1,354,729 - 1.0
1,354,751 + -0.8
1,354,757 + -0.5
1,354,884 - 0.2
1,354,900 - 0.1
1,354,902 + 0.6
1,354,904 - -1.0
1,354,925 + 0.0
1,355,032 + 0.1