Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5911

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5910: 14278 - K11094 SNRPB2 U2 small nuclear ribonucleoprotein B'', at 1222934 to 1224150 14278 mRNA_5911: 14279 - ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSitePatterns-EGF-like domain signature 2.-PS01186,ProSiteProfiles-EGF-like domain profile.-PS50026, at 1224353 to 1227750 14279 mRNA_5912: 14280 - K11375 ELP4 elongator complex protein 4, at 1228297 to 1229962 14280

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,224,150 - 0.4
1,224,188 - -0.9
1,224,277 + -0.4
1,224,301 + 0.3
1,224,329 + -1.1
1,224,464 + -0.2
1,224,863 - 14279 mRNA_5911 0.15 0.6
1,224,965 - 14279 mRNA_5911 0.18 0.6
1,225,061 + 14279 mRNA_5911 0.21 1.0
1,225,141 - 14279 mRNA_5911 0.23 -0.9
1,225,284 + 14279 mRNA_5911 0.27 0.2
1,225,332 + 14279 mRNA_5911 0.29 -1.0
1,225,620 - 14279 mRNA_5911 0.37 -0.0
1,225,620 - 14279 mRNA_5911 0.37 0.4
1,225,624 + 14279 mRNA_5911 0.37 -0.0
1,225,798 - 14279 mRNA_5911 0.43 -0.4
1,225,831 - 14279 mRNA_5911 0.43 -1.0
1,225,895 + 14279 mRNA_5911 0.45 -1.6
1,225,937 + 14279 mRNA_5911 0.47 -0.1
1,226,056 + 14279 mRNA_5911 0.50 -0.0
1,226,134 - 14279 mRNA_5911 0.52 -0.2
1,226,217 + 14279 mRNA_5911 0.55 -0.4
1,226,385 - 14279 mRNA_5911 0.60 -0.4
1,226,403 - 14279 mRNA_5911 0.60 0.8
1,226,411 + 14279 mRNA_5911 0.61 1.0
1,226,519 + 14279 mRNA_5911 0.64 0.7
1,226,668 - 14279 mRNA_5911 0.68 0.2
1,226,937 - 14279 mRNA_5911 0.76 -0.0
1,227,081 + 14279 mRNA_5911 0.80 0.9
1,227,650 - 1.9
1,227,831 + -0.2
1,228,417 - 0.3
1,228,665 + 14280 mRNA_5912 0.22 0.8
1,228,711 - 14280 mRNA_5912 0.25 0.7