Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5840

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5839: 14207 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 1057986 to 1059874 14207 mRNA_5840: 14208 - Hypothetical Protein, at 1060161 to 1062503 14208 mRNA_5841: 14209 - KOG1577 Aldo/keto reductase family proteins, at 1062734 to 1064125 14209

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
1,059,267 + 14207 mRNA_5839 0.68 -0.4
1,059,657 + 14207 mRNA_5839 0.88 -0.1
1,059,693 + 0.3
1,059,703 + 0.4
1,059,704 - 1.2
1,059,715 + 0.7
1,059,856 - 0.1
1,059,861 + 1.0
1,059,998 + -0.4
1,060,146 + 0.9
1,060,596 - 14208 mRNA_5840 0.19 0.1
1,060,740 - 14208 mRNA_5840 0.25 0.1
1,060,749 + 14208 mRNA_5840 0.25 1.6
1,060,891 + 14208 mRNA_5840 0.31 -0.8
1,061,154 - 14208 mRNA_5840 0.42 0.7
1,061,174 + 14208 mRNA_5840 0.43 -0.0
1,061,491 - 14208 mRNA_5840 0.57 0.2
1,061,788 + 14208 mRNA_5840 0.69 1.5
1,062,494 + 1.2
1,062,617 - -0.1
1,062,626 + -0.5
1,062,654 - -0.1
1,062,699 - -0.4
1,062,933 - 14209 mRNA_5841 0.14 0.4
1,062,935 - 14209 mRNA_5841 0.14 0.0
1,062,952 - 14209 mRNA_5841 0.16 -0.6
1,063,094 - 14209 mRNA_5841 0.26 0.5
1,063,097 + 14209 mRNA_5841 0.26 0.1
1,063,099 + 14209 mRNA_5841 0.26 -0.3
1,063,105 + 14209 mRNA_5841 0.27 0.5
1,063,107 + 14209 mRNA_5841 0.27 -0.0
1,063,132 - 14209 mRNA_5841 0.29 0.3
1,063,249 + 14209 mRNA_5841 0.37 -0.4
1,063,256 - 14209 mRNA_5841 0.38 1.0
1,063,274 - 14209 mRNA_5841 0.39 -1.0