Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5802

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972859 to 974663 14169 mRNA_5802: 14170 - K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase, at 974820 to 975968 14170 mRNA_5803: 14171 - Hypothetical Protein, at 976295 to 977367 14171

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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973,821 - 14169 mRNA_5801 0.53 0.6
973,951 + 14169 mRNA_5801 0.60 0.5
974,411 - 14169 mRNA_5801 0.86 -0.0
974,834 - 0.7
975,757 - 14170 mRNA_5802 0.82 -0.0
975,761 - 14170 mRNA_5802 0.82 -0.7
975,771 - 14170 mRNA_5802 0.83 -0.3
975,771 - 14170 mRNA_5802 0.83 -0.1
975,910 - 0.4
975,924 + 1.2
975,927 + 0.3
976,092 + 0.6
976,218 - 0.8
976,221 + 0.5
976,231 + -2.1
976,359 - -0.6
976,474 + 14171 mRNA_5803 0.17 -0.8
976,500 - 14171 mRNA_5803 0.19 -0.3
976,602 - 14171 mRNA_5803 0.29 -0.1
976,698 - 14171 mRNA_5803 0.38 -0.1
976,958 - 14171 mRNA_5803 0.62 0.4