Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5678

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5677: 14045 - K15901 CGI121, TPRKB EKC/KEOPS complex subunit CGI121/TPRKB, at 672495 to 673304 14045 mRNA_5678: 14046 - K06005 SAP candidapepsin, at 673852 to 675422 14046 mRNA_5679: 14047 - KOG1944 Peroxisomal membrane protein MPV17 and related proteins, at 675766 to 676852 14047

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
672,887 + 14045 mRNA_5677 0.48 0.9
672,891 - 14045 mRNA_5677 0.49 0.1
672,896 + 14045 mRNA_5677 0.50 -0.4
672,903 - 14045 mRNA_5677 0.50 -0.3
672,910 + 14045 mRNA_5677 0.51 0.2
673,040 + 14045 mRNA_5677 0.67 -1.6
673,049 - 14045 mRNA_5677 0.68 0.2
673,050 + 14045 mRNA_5677 0.69 0.3
673,051 - 14045 mRNA_5677 0.69 0.3
673,072 - 14045 mRNA_5677 0.71 0.1
673,347 + 0.1
673,458 - -1.2
673,493 + 0.0
673,628 - -0.3
673,631 - -0.4
673,645 + -1.0
673,651 - 0.4
673,657 - 1.5
673,661 + 0.2
673,662 + -0.7
673,670 + 0.2
673,673 - -0.1
673,678 + -0.1
673,680 - 0.6
673,680 + 0.4
673,680 - 0.4
673,684 + -0.6
673,703 - 0.5
673,707 + 1.1
673,709 + -0.6
673,710 + 1.1
673,721 + 0.7
673,740 - -1.6
673,796 - -0.8
673,797 + -0.1
673,798 + -0.2
673,831 + -0.5
673,861 - 0.0
673,890 + -0.7
673,911 + 0.9
673,911 + 0.4
674,048 + 14046 mRNA_5678 0.12 0.0
674,221 - 14046 mRNA_5678 0.23 1.7
674,351 - 14046 mRNA_5678 0.32 0.9
674,354 + 14046 mRNA_5678 0.32 0.0
674,360 - 14046 mRNA_5678 0.32 -2.7
674,461 + 14046 mRNA_5678 0.39 0.2
674,811 - 14046 mRNA_5678 0.61 -0.3
674,817 - 14046 mRNA_5678 0.61 1.9
674,818 + 14046 mRNA_5678 0.61 1.7
675,042 + 14046 mRNA_5678 0.76 -1.5
675,095 + 14046 mRNA_5678 0.79 0.8
675,215 - 14046 mRNA_5678 0.87 0.8
675,492 + -0.1
675,542 + -0.5
675,585 - 1.2
675,654 + 0.1
676,395 + 14047 mRNA_5679 0.58 0.5