Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5573

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5572: 13940 - K18730 GIGYF PERQ amino acid-rich with GYF domain-containing protein, at 405680 to 409565 13940 mRNA_5573: 13941 - BLAST Protein priA [Hypsizygus marmoreus], at 409933 to 411114 13941

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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409,527 + -1.4
409,575 - -0.2
409,590 + -1.4
409,598 - -0.6
409,614 + -0.0
409,614 + -0.9
409,617 - 0.3
409,624 + 1.3
409,670 - 0.3
409,696 - 0.1
409,717 - -0.6
409,730 + -0.8
409,755 - 0.6
409,834 - 0.0
409,863 - 1.4
409,939 + 1.1
410,023 + -0.7
410,040 + 0.7
410,115 + 13941 mRNA_5573 0.15 -0.6
410,306 + 13941 mRNA_5573 0.32 -0.8
410,323 + 13941 mRNA_5573 0.33 0.5
410,562 + 13941 mRNA_5573 0.53 0.4
410,580 + 13941 mRNA_5573 0.55 0.1
410,769 + 13941 mRNA_5573 0.71 -1.3
410,799 + 13941 mRNA_5573 0.73 -2.3
410,808 + 13941 mRNA_5573 0.74 -0.0
410,828 - 13941 mRNA_5573 0.76 -0.5
410,852 - 13941 mRNA_5573 0.78 0.0
410,865 + 13941 mRNA_5573 0.79 0.3
410,988 + 13941 mRNA_5573 0.89 -1.0
411,001 - -0.4
411,007 + 1.0
411,010 + 0.1
411,036 + 0.3
411,059 - -0.0
411,130 - -0.5
411,136 + 0.1
411,149 - -1.4
411,173 - -1.0
411,180 + -0.2
411,185 + 1.7
411,198 + 1.2
411,198 + 0.9
411,220 - -1.1
411,264 - -0.0
411,269 + -0.4
411,271 + -0.4
411,282 + 0.5
411,288 - -0.0
411,293 + -0.8
411,296 - 0.4
411,307 + 0.7
411,310 - 0.0
411,311 - 0.0
411,312 + -0.2
411,315 + 2.4
411,316 - 0.2
411,317 + -1.2
411,317 + 0.3
411,318 + -0.5
411,319 - -1.1
411,319 + 0.6
411,322 - 0.4
411,328 - 0.3
411,337 - 0.6
411,337 + -0.4
411,338 + 0.2
411,345 - 1.8
411,364 - 0.2
411,368 - -2.2
411,374 - 0.0
411,383 - 2.0
411,388 - -2.4
411,395 + -0.6
411,412 + 0.2
411,416 + -0.6
411,424 - 0.2
411,427 - -0.1
411,433 + -0.5
411,438 - 0.3
411,449 - 0.2
411,453 + -0.3
411,455 - 1.0
411,458 - 0.8
411,465 - 0.2
411,466 - 0.3
411,475 + -0.2
411,482 + -0.2
411,489 - -0.3
411,496 - -0.8
411,503 + 0.3
411,504 - 1.0
411,524 - -1.3
411,531 + 0.3
411,541 - 0.2
411,555 - 2.0
411,569 + 0.1
411,570 - -0.4
411,588 - 0.2
411,600 - 0.7
411,619 + 1.4
411,621 - 0.8
411,646 - -0.3
411,651 - 0.2
411,652 - 0.9
411,652 - -0.1
411,657 + 0.4
411,659 + 1.4
411,659 - -0.5
411,661 - -0.3
411,662 - -0.1
411,663 - 0.6
411,663 - -0.5
411,663 + 1.1
411,666 + 0.3
411,672 + 0.1
411,679 + 1.2
411,683 - 0.9
411,684 + -0.7
411,685 + 0.5
411,685 + 0.5
411,685 - 0.4
411,687 - 0.0
411,690 + 0.2
411,692 + -0.5
411,693 + -0.1
411,697 - 0.2
411,702 + -0.2
411,702 - 0.1
411,703 + 0.7
411,707 + 0.3
411,707 + -0.0
411,711 + -0.2
411,715 + 1.0
411,716 + -1.7
411,723 + -0.6
411,727 - -1.3
411,727 + -0.7
411,729 - 0.4
411,742 - -0.2
411,746 - 0.6
411,751 - 0.1
411,754 - -3.1
411,755 + 0.1
411,756 + 0.0
411,761 + 0.3
411,765 - -0.4
411,773 - 0.1
411,774 + -0.7
411,774 + 0.1
411,775 + 0.5
411,775 + -0.6
411,776 + -0.4
411,776 - 0.2
411,781 - -0.4
411,784 + -1.5
411,785 - 0.6
411,788 - 0.7
411,789 - -0.8
411,795 + 0.8
411,795 - -0.8
411,799 + 0.7
411,799 + 0.4
411,801 - 0.3
411,802 - 0.3
411,802 - -1.6
411,815 - 0.4
411,822 - -0.5
411,826 + 0.8
411,831 + -0.0
411,876 + 0.4
411,932 - 0.3
411,948 - -0.5
411,955 + -1.0
411,959 - -1.4
411,959 + 0.1
411,979 + -0.9
411,980 + 0.6
411,985 - 0.2
411,987 + 0.4
411,989 + 0.3
412,064 + 0.9
412,097 + -0.3
412,097 - 1.3