Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5394

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5394: 13762 - SUPERFAMILY--SSF54897, at 121 to 1074 13762 mRNA_5395: 13763 - KOG4551 GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis, at 1148 to 1997 13763

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1 + -0.6
1 + 0.5
1 + 1.5
1 + -0.5
23 + -1.9
29 + 0.7
29 + 0.8
34 + 0.3
39 + 0.6
39 + -0.4
47 + -0.5
50 + 0.2
50 + 1.4
50 + -1.5
50 + 1.7
50 - -1.0
51 + -0.5
61 + 0.8
62 + -0.2
96 + 0.0
116 + 0.5
158 - 0.3
159 - 0.1
160 - 0.3
169 - 0.4
180 - -1.0
189 + 0.7
198 + 0.8
201 - 0.6
208 - -0.4
210 + -0.1
225 + 13762 mRNA_5394 0.11 0.2
225 + 13762 mRNA_5394 0.11 -0.0
244 + 13762 mRNA_5394 0.13 -2.6
245 - 13762 mRNA_5394 0.13 1.2
271 - 13762 mRNA_5394 0.16 0.9
276 - 13762 mRNA_5394 0.16 -1.1
277 + 13762 mRNA_5394 0.16 -0.5
280 - 13762 mRNA_5394 0.17 -0.0
306 + 13762 mRNA_5394 0.19 0.4
317 - 13762 mRNA_5394 0.21 -0.1
345 + 13762 mRNA_5394 0.23 0.8
345 - 13762 mRNA_5394 0.23 -1.6
347 + 13762 mRNA_5394 0.24 -0.1
359 - 13762 mRNA_5394 0.25 0.6
387 - 13762 mRNA_5394 0.28 -0.3
399 + 13762 mRNA_5394 0.29 0.6
434 + 13762 mRNA_5394 0.33 -0.4
447 - 13762 mRNA_5394 0.34 0.2
485 - 13762 mRNA_5394 0.38 0.5
543 + 13762 mRNA_5394 0.44 -0.4
649 + 13762 mRNA_5394 0.55 -0.4
667 + 13762 mRNA_5394 0.57 1.2
667 - 13762 mRNA_5394 0.57 0.5
678 - 13762 mRNA_5394 0.58 0.2
718 + 13762 mRNA_5394 0.63 0.6
723 + 13762 mRNA_5394 0.63 -1.1
802 + 13762 mRNA_5394 0.71 0.4
806 + 13762 mRNA_5394 0.72 -1.6
905 - 13762 mRNA_5394 0.82 0.3
911 + 13762 mRNA_5394 0.83 0.2
965 + 13762 mRNA_5394 0.88 0.2
966 + 13762 mRNA_5394 0.89 -1.1
968 + 13762 mRNA_5394 0.89 1.5
1,014 - 0.8
1,084 - -0.7
1,103 - 0.4
1,110 + 0.3
1,245 - 13763 mRNA_5395 0.11 -0.6
1,260 - 13763 mRNA_5395 0.13 0.1
1,376 - 13763 mRNA_5395 0.27 -0.3
1,438 + 13763 mRNA_5395 0.34 0.1
1,438 + 13763 mRNA_5395 0.34 -2.4
1,438 + 13763 mRNA_5395 0.34 1.2
1,523 + 13763 mRNA_5395 0.44 -0.1
1,528 - 13763 mRNA_5395 0.45 0.3
1,533 + 13763 mRNA_5395 0.45 0.7
1,538 + 13763 mRNA_5395 0.46 -0.4
1,538 - 13763 mRNA_5395 0.46 -0.8
1,556 + 13763 mRNA_5395 0.48 0.7
1,639 + 13763 mRNA_5395 0.58 0.2
1,854 - 13763 mRNA_5395 0.83 0.1
1,855 - 13763 mRNA_5395 0.83 -0.4
1,887 - 13763 mRNA_5395 0.87 0.9
1,908 - 13763 mRNA_5395 0.89 0.8
2,000 - -0.9
2,009 + -0.2