Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5357

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5356: 13724 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 531177 to 533794 13724 mRNA_5357: 13725 - HMMPfam-Methyltransferase domain-PF12847,SUPERFAMILY--SSF53335, at 533948 to 534977 13725 mRNA_5358: 13726 - Hypothetical Protein, at 535285 to 536423 13726

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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533,038 - 13724 mRNA_5356 0.71 -0.0
533,048 + 13724 mRNA_5356 0.71 0.2
533,132 - 13724 mRNA_5356 0.75 -1.1
533,218 + 13724 mRNA_5356 0.78 0.7
533,229 - 13724 mRNA_5356 0.78 -0.2
533,236 - 13724 mRNA_5356 0.79 -0.0
533,240 + 13724 mRNA_5356 0.79 0.2
533,364 - 13724 mRNA_5356 0.84 -0.6
533,565 + -0.8
533,565 - -0.0
533,648 - -1.2
533,651 - 0.9
533,676 - -0.2
533,833 + -0.9
533,954 - -2.4
534,377 + 13725 mRNA_5357 0.42 1.5
534,442 + 13725 mRNA_5357 0.48 0.6
534,554 + 13725 mRNA_5357 0.59 0.2
534,670 - 13725 mRNA_5357 0.70 0.3
534,688 + 13725 mRNA_5357 0.72 -0.5
534,821 + 13725 mRNA_5357 0.85 0.5
534,866 - 13725 mRNA_5357 0.89 -0.1
534,967 - -0.0
534,975 + 0.4
535,010 + 0.1
535,074 + -0.3
535,090 - 0.1
535,091 + 1.2
535,127 - -0.5
535,135 - -0.2
535,141 + 1.4
535,153 + -0.9
535,176 - 0.5
535,189 + 0.0