Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5330

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5330: 13698 - BLAST ZYRO0C04598p [Zygosaccharomyces rouxii], at 471272 to 473464 13698 mRNA_5331: 13699 - SUPERFAMILY--SSF52047, at 473951 to 475290 13699

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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470,875 + 1.2
470,877 - -0.6
470,879 + -1.5
471,012 - 0.6
471,040 + -0.2
471,054 - -0.2
471,057 + -0.8
471,060 - 0.1
471,060 - -1.1
471,062 - 0.4
471,202 - -1.1
471,224 - -0.2
471,608 + 13698 mRNA_5330 0.15 -1.1
471,664 + 13698 mRNA_5330 0.18 -0.4
471,793 + 13698 mRNA_5330 0.24 0.7
472,047 + 13698 mRNA_5330 0.35 0.3
472,234 - 13698 mRNA_5330 0.44 -0.3
472,823 + 13698 mRNA_5330 0.71 -0.5
472,838 + 13698 mRNA_5330 0.71 -0.0
473,156 - 13698 mRNA_5330 0.86 0.0
473,251 - -0.1
473,302 + -0.6
473,303 - -0.6
473,576 - 0.0
473,576 - 0.3
473,576 + -0.8
473,578 - -0.3
473,580 - 0.3
473,582 - -0.2
473,585 + 0.9
473,589 - -1.2
473,601 - 0.8
473,729 + -0.1
473,859 + 2.4
473,873 + 0.2
473,887 - -0.2
474,023 - -0.7
474,303 - 13699 mRNA_5331 0.26 -0.1
474,313 + 13699 mRNA_5331 0.27 -1.7
474,316 + 13699 mRNA_5331 0.27 0.2
474,319 + 13699 mRNA_5331 0.27 0.5
474,407 - 13699 mRNA_5331 0.34 0.2
474,460 + 13699 mRNA_5331 0.38 0.3