Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5303

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5303: 13671 - K17608 STRN1_3_4 striatin 1/3/4, at 405190 to 408801 13671 mRNA_5304: 13672 - KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230, at 409088 to 413869 13672

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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404,267 + -0.4
404,280 - 0.7
404,286 + 0.3
404,397 - -0.6
404,401 - -0.2
404,403 - -2.0
404,420 - 0.9
404,420 + 0.5
404,505 - -0.3
404,505 - -0.1
404,525 - -0.6
404,538 + 0.8
404,539 - -0.0
404,654 - -1.3
404,654 - 0.5
404,655 - -0.3
404,666 + -0.3
404,675 + 0.4
404,814 - -0.4
404,842 - 0.7
404,868 - 0.7
404,946 - 0.7
404,986 + 0.5
405,003 + 1.0
405,114 + 1.0
406,006 + 13671 mRNA_5303 0.23 0.6
406,233 - 13671 mRNA_5303 0.29 -2.7
406,424 - 13671 mRNA_5303 0.34 0.7
406,574 - 13671 mRNA_5303 0.38 1.0
406,888 - 13671 mRNA_5303 0.47 0.7
406,912 - 13671 mRNA_5303 0.48 -0.1
406,936 + 13671 mRNA_5303 0.48 -0.2
406,986 - 13671 mRNA_5303 0.50 0.4
406,995 - 13671 mRNA_5303 0.50 0.9
407,008 - 13671 mRNA_5303 0.50 -1.2
407,018 - 13671 mRNA_5303 0.51 2.9
407,584 - 13671 mRNA_5303 0.66 1.8
407,989 + 13671 mRNA_5303 0.77 -0.3
408,060 - 13671 mRNA_5303 0.79 0.5
408,182 - 13671 mRNA_5303 0.83 1.6
408,485 + 0.2
408,522 + 1.0
408,525 + 0.9
408,596 + 0.2
408,806 + 0.6
408,881 - -0.0
409,158 - -0.9
409,176 + -1.1
409,330 - 0.6
409,336 + -0.1
409,363 - 0.3
409,682 + 13672 mRNA_5304 0.12 0.3