Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5297

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5296: 13664 - Hypothetical Protein, at 382436 to 382844 13664 mRNA_5297: 13665 - Hypothetical Protein, at 383150 to 384089 13665

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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382,205 - -0.6
382,232 + -1.4
382,255 - 0.2
382,276 - 1.2
382,281 + 1.2
382,353 - -0.1
382,354 + 1.1
382,379 + 0.4
382,386 + 0.5
382,561 + 13664 mRNA_5296 0.31 0.1
382,614 + 13664 mRNA_5296 0.44 0.4
382,638 - 13664 mRNA_5296 0.49 0.1
382,656 + 13664 mRNA_5296 0.54 0.4
382,747 + 13664 mRNA_5296 0.76 0.2
382,809 - 0.5
382,812 - 0.2
382,813 + -0.3
382,814 - 0.4
382,823 - 0.4
382,823 - 0.6
382,824 - 0.9
382,848 - 0.2
382,864 - 0.1
382,869 + 0.4
382,874 - 0.2
382,879 + -0.4
382,882 - 0.2
382,883 + -0.1
382,885 - 0.2
382,907 - -0.5
382,911 + 0.4
382,912 - 0.1
382,921 + -2.0
382,961 - 0.4
382,973 - -0.5
383,002 + 0.9
383,003 - -0.3
383,033 - 0.8
383,047 - 0.1
383,051 - 0.7
383,066 + 1.0
383,067 + 0.4
383,074 - 0.3
383,085 - -0.4
383,097 - -0.2
383,099 - -0.4
383,114 - 1.6
383,134 + 0.0
383,138 + -0.6
383,146 - -1.1
383,156 + 1.1
383,162 - -0.3
383,163 - 0.2
383,164 + -0.6
383,165 - 1.5
383,195 - -0.1
383,198 + -0.4
383,204 - 0.3
383,212 - -0.0
383,223 - 0.5
383,266 + 13665 mRNA_5297 0.12 1.0
383,276 - 13665 mRNA_5297 0.13 -0.6
383,370 - 13665 mRNA_5297 0.23 0.0
383,377 - 13665 mRNA_5297 0.24 -0.8
383,384 + 13665 mRNA_5297 0.25 -0.2
383,416 - 13665 mRNA_5297 0.28 -0.3
383,417 + 13665 mRNA_5297 0.28 0.1
383,423 + 13665 mRNA_5297 0.29 -0.0
383,430 + 13665 mRNA_5297 0.30 -0.8
383,535 + 13665 mRNA_5297 0.41 0.4
383,543 - 13665 mRNA_5297 0.42 0.2
383,707 + 13665 mRNA_5297 0.59 0.1
383,728 + 13665 mRNA_5297 0.61 0.6
383,745 + 13665 mRNA_5297 0.63 -0.7
383,861 + 13665 mRNA_5297 0.76 1.5
383,969 - 13665 mRNA_5297 0.87 -0.5
384,018 + 1.0
384,173 - -0.7
384,184 + 0.1
384,198 - -0.1
384,272 - -0.4
384,292 - -0.8
384,294 - 0.6
384,296 - 1.0
384,306 + 1.0
384,340 - -0.1
384,343 + 0.8
384,345 - 0.6
384,347 - 0.9
384,350 - 2.1
384,353 - -0.3
384,353 + 1.4
384,355 - 0.0
384,355 - 1.2
384,359 + -0.4
384,372 - 0.9
384,377 + -1.0
384,378 + 0.1
384,379 + 0.5
384,379 - 0.7
384,383 + -0.8
384,391 + 1.0
384,398 + 0.3
384,419 - 0.8
384,430 - 0.4
384,435 - 0.5
384,463 + -0.5
384,463 + -1.1
384,465 - 0.3
384,489 - 0.8
384,652 + 1.7
384,763 + 0.8
384,999 - 1.4