Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5291

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5290: 13658 - HMMPfam-ARID/BRIGHT DNA binding domain-PF01388,ProSiteProfiles-ARID domain profile.-PS51011,SMART-BRIGHT, ARID (A/T-rich interaction domain) domain-SM00501,SMART-ARID/BRIGHT DNA binding domain-SM01014,SUPERFAMILY--SSF46774, at 365926 to 369880 13658 mRNA_5291: 13659 - K00799 GST, gst glutathione S-transferase, at 370278 to 371436 13659 mRNA_5292: 13660 - Hypothetical Protein, at 372061 to 373005 13660

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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369,547 - -0.6
369,581 - -1.4
369,591 + -0.5
369,694 - 0.1
369,730 + 0.4
369,743 - -0.3
369,743 + 0.3
369,873 + -0.9
369,885 - 0.0
369,900 + -0.7
369,902 - -0.8
370,012 - -0.5
370,020 - 2.6
370,020 - -1.4
370,021 - 0.5
370,033 + -1.4
370,036 + -0.7
370,039 - -0.3
370,039 - 1.1
370,043 + -0.2
370,070 - 0.1
370,091 - -0.0
370,095 + 1.8
370,097 + -0.6
370,202 + 2.5
370,489 - 13659 mRNA_5291 0.18 -0.1
370,521 + 13659 mRNA_5291 0.21 0.4
370,738 - 13659 mRNA_5291 0.40 0.2
370,786 - 13659 mRNA_5291 0.44 0.5
370,923 - 13659 mRNA_5291 0.56 -0.0
370,930 - 13659 mRNA_5291 0.56 -0.2
371,347 + 0.2
371,368 + 0.7
371,380 - 1.0
371,442 + -1.0
371,517 - -0.1
371,636 - -1.9
371,638 - 0.3
371,642 - -0.2
371,643 + 0.1
371,646 + 0.3
371,668 + 0.0
371,670 - -0.1
371,672 + 0.0
371,727 - 0.1
371,728 - 2.2
371,729 + 0.6
371,735 - -0.3
371,736 + -0.6
371,736 + 0.1
371,745 + 0.1
371,746 + -0.4
371,748 - -0.8
371,751 + 0.1
371,751 + -0.6
371,756 + -0.7
371,757 - -0.5
371,782 - -0.2
371,783 - 1.4
371,806 + -0.6
371,895 - 0.7
371,904 - -0.1
371,984 - 1.3
371,990 + -0.3
372,000 + 0.2
372,005 + 0.9
372,008 - -0.0
372,014 + 0.4
372,051 + 0.5
372,067 + -0.1
372,068 - 0.1
372,109 - 0.3
372,125 - 0.9
372,155 + 0.4
372,290 + 13660 mRNA_5292 0.24 0.1
372,409 - 13660 mRNA_5292 0.37 -0.4
372,435 + 13660 mRNA_5292 0.40 0.8