Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5271

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5270: 13638 - Hypothetical Protein, at 326289 to 326690 13638 mRNA_5271: 13639 - K11841 USP10, UBP3 ubiquitin carboxyl-terminal hydrolase 10, at 327225 to 330329 13639 mRNA_5272: 13640 - K02731 PSMA7 20S proteasome subunit alpha 4, at 330546 to 332091 13640

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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326,340 + 13638 mRNA_5270 0.13 0.5
326,342 - 13638 mRNA_5270 0.13 -0.1
326,345 - 13638 mRNA_5270 0.14 -1.1
326,481 + 13638 mRNA_5270 0.48 -0.2
326,644 + 13638 mRNA_5270 0.88 -0.4
326,646 - 13638 mRNA_5270 0.89 -2.1
326,656 - -0.0
326,657 + 0.3
326,660 + -1.0
326,688 - -0.6
326,694 + -1.4
326,708 + 2.1
326,713 - 1.2
326,724 + 0.6
326,732 - 0.5
326,803 + -0.2
326,806 + -0.7
326,838 + 0.1
326,878 + 0.1
326,884 + -0.1
326,885 + -0.7
327,010 - 0.2
327,011 - -0.3
327,065 + 0.2
327,111 - -0.9
327,420 - -1.2
327,443 + -0.6
328,034 + 13639 mRNA_5271 0.26 -0.8
329,179 - 13639 mRNA_5271 0.63 0.1
329,189 - 13639 mRNA_5271 0.63 -1.6
329,771 - 13639 mRNA_5271 0.82 -0.8
330,385 + 0.3
330,972 - 13640 mRNA_5272 0.28 1.4