Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5230

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209416 to 215994 13598 mRNA_5231: 13599 - Hypothetical Protein, at 216501 to 218178 13599

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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208,778 + -0.2
208,793 + -1.2
208,812 + 0.1
208,922 - 0.6
208,964 + -0.4
209,051 + -0.7
209,071 + 0.5
209,076 + -0.5
209,085 + 0.5
209,219 + -0.2
209,327 + 0.3
209,389 - -0.0
209,418 + 0.6
209,521 - -0.9
209,764 - -1.0
209,785 - -0.3
209,790 - -0.1
209,821 - 0.6
209,908 + 1.0
209,932 + 0.4
209,950 - -0.3
209,988 - 0.6
210,057 - -0.2
210,073 + -0.0
210,125 + 13598 mRNA_5230 0.11 -0.3
210,467 + 13598 mRNA_5230 0.16 0.5
210,659 - 13598 mRNA_5230 0.19 0.3
210,674 - 13598 mRNA_5230 0.19 1.1
210,725 - 13598 mRNA_5230 0.20 0.5
210,768 + 13598 mRNA_5230 0.21 1.4
210,878 + 13598 mRNA_5230 0.22 1.0
211,094 - 13598 mRNA_5230 0.26 1.1
211,098 + 13598 mRNA_5230 0.26 -0.4
211,533 + 13598 mRNA_5230 0.32 0.2
211,624 + 13598 mRNA_5230 0.34 -1.3
211,629 - 13598 mRNA_5230 0.34 -0.1
211,728 - 13598 mRNA_5230 0.35 -0.2
211,939 - 13598 mRNA_5230 0.38 -0.0
211,942 + 13598 mRNA_5230 0.38 0.3
212,045 + 13598 mRNA_5230 0.40 0.3
212,077 + 13598 mRNA_5230 0.40 0.0
212,209 + 13598 mRNA_5230 0.42 0.1
212,508 + 13598 mRNA_5230 0.47 1.1
212,536 + 13598 mRNA_5230 0.47 -0.1
212,848 - 13598 mRNA_5230 0.52 1.4
212,910 - 13598 mRNA_5230 0.53 0.0
213,045 + 13598 mRNA_5230 0.55 0.5
213,103 - 13598 mRNA_5230 0.56 1.1
213,375 + 13598 mRNA_5230 0.60 0.3
213,384 - 13598 mRNA_5230 0.60 -1.1
213,768 + 13598 mRNA_5230 0.66 0.0
213,795 + 13598 mRNA_5230 0.67 0.3
213,906 + 13598 mRNA_5230 0.68 -0.6
214,375 + 13598 mRNA_5230 0.75 -1.2
214,906 + 13598 mRNA_5230 0.83 0.3
214,937 + 13598 mRNA_5230 0.84 0.6
215,355 - 0.0
215,380 - -1.7
215,386 + 0.0
215,573 + 1.0
215,649 + -0.5
215,652 - -0.2
215,807 + 0.1
215,920 + -0.6
215,947 + -1.4
215,952 - 0.5
215,976 + 1.4
216,104 - -0.1
216,216 - 0.3
216,296 + -0.4
216,375 - 0.1
216,378 + -0.7
216,423 + 0.8
216,429 - 0.6
216,579 + -1.1
216,673 + 13599 mRNA_5231 0.10 -0.3
216,705 - 13599 mRNA_5231 0.12 -0.2
216,812 + 13599 mRNA_5231 0.19 0.5