Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5149

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5148: 13516 - K17918 SNX3_12 sorting nexin-3/12, at 17697 to 18440 13516 mRNA_5149: 13517 - Hypothetical Protein, at 18880 to 20047 13517 mRNA_5150: 13518 - Hypothetical Protein, at 20329 to 21379 13518

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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17,973 + 13516 mRNA_5148 0.37 -1.7
18,229 + 13516 mRNA_5148 0.72 0.9
18,306 + 13516 mRNA_5148 0.82 0.2
18,445 + 0.3
18,531 + -1.0
18,594 - 0.7
18,604 + -0.1
18,622 + 0.8
18,726 + -0.1
18,769 + 0.2
18,917 + -1.1
18,926 - 0.4
18,987 - 1.2
19,031 + 13517 mRNA_5149 0.13 0.2
19,047 - 13517 mRNA_5149 0.14 0.3
19,051 + 13517 mRNA_5149 0.15 1.2
19,051 + 13517 mRNA_5149 0.15 -0.1
19,054 - 13517 mRNA_5149 0.15 0.2
19,060 + 13517 mRNA_5149 0.15 -0.3
19,178 - 13517 mRNA_5149 0.26 -0.1
19,187 - 13517 mRNA_5149 0.26 0.1
19,194 + 13517 mRNA_5149 0.27 1.2
19,204 + 13517 mRNA_5149 0.28 -0.4
19,209 + 13517 mRNA_5149 0.28 0.5
19,351 + 13517 mRNA_5149 0.40 0.5
19,369 - 13517 mRNA_5149 0.42 -1.2
19,641 + 13517 mRNA_5149 0.65 -0.5
19,735 + 13517 mRNA_5149 0.73 0.7
19,763 + 13517 mRNA_5149 0.76 0.4
19,962 - 0.9
20,503 - 13518 mRNA_5150 0.17 -0.0
20,678 + 13518 mRNA_5150 0.33 0.4
20,756 - 13518 mRNA_5150 0.41 0.9
21,003 - 13518 mRNA_5150 0.64 -0.1