Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5093

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5092: 13460 - HMMPfam-RTA1 like protein-PF04479, at 1730393 to 1731831 13460 mRNA_5093: 13461 - Hypothetical Protein, at 1732300 to 1732990 13461 mRNA_5094: 13462 - K10259 MET30 F-box and WD-40 domain protein MET30, at 1733465 to 1736154 13462

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,731,518 - 13460 mRNA_5092 0.78 -0.5
1,731,520 - 13460 mRNA_5092 0.78 0.4
1,731,526 + 13460 mRNA_5092 0.79 -0.0
1,731,677 - 13460 mRNA_5092 0.89 -0.5
1,731,694 + -0.1
1,731,831 - -0.9
1,731,845 - -0.2
1,731,848 + -0.1
1,731,851 + -0.0
1,731,853 - -0.9
1,731,862 + 0.3
1,731,938 - 1.4
1,731,979 - -0.3
1,731,986 + -0.5
1,731,987 + 1.3
1,731,987 + 0.8
1,731,990 - -0.2
1,731,997 - -0.7
1,732,016 - 0.1
1,732,017 + 0.0
1,732,120 - 0.1
1,732,125 + -1.3
1,732,129 - 0.4
1,732,142 + 0.4
1,732,149 - -1.4
1,732,149 + 0.2
1,732,152 + 0.4
1,732,161 - 0.1
1,732,271 - -0.2
1,732,274 - -0.5
1,732,293 + -0.6
1,732,580 + 13461 mRNA_5093 0.41 0.9
1,732,729 + 13461 mRNA_5093 0.62 -0.1
1,732,894 + 13461 mRNA_5093 0.86 0.8
1,732,998 + -2.2
1,733,111 - 1.0
1,733,132 - 0.2
1,733,150 - 1.6
1,733,155 + 0.2
1,733,162 - -0.6
1,733,167 + 0.1
1,733,274 - 0.9
1,733,275 - 0.9
1,733,276 + -1.4
1,733,282 - 0.4
1,733,301 - -0.1
1,733,323 + 0.6
1,733,425 - 0.7
1,733,428 - 0.9
1,733,438 + -0.0
1,733,440 + -0.2
1,733,453 + 0.6
1,733,453 + -0.2