Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4882

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4881: 13249 - K01890 FARSB, pheT phenylalanyl-tRNA synthetase beta chain, at 1212662 to 1215264 13249 mRNA_4882: 13250 - Hypothetical Protein, at 1215756 to 1216865 13250 mRNA_4883: 13251 - HMMPfam-Uncharacterised protein family (UPF0203)-PF05254, at 1217167 to 1217657 13251

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,215,273 + -0.2
1,215,283 + 2.7
1,215,430 + -0.6
1,215,432 - 1.0
1,215,439 - 0.2
1,215,441 + -1.3
1,215,457 - -0.3
1,215,483 - 0.6
1,215,576 - 0.3
1,215,605 - -0.8
1,215,716 + 0.2
1,215,725 - 0.1
1,215,729 - -0.4
1,216,024 - 13250 mRNA_4882 0.24 1.0
1,216,341 - 13250 mRNA_4882 0.53 0.5
1,216,360 + 13250 mRNA_4882 0.54 0.1
1,216,478 - 13250 mRNA_4882 0.65 -0.1
1,216,479 - 13250 mRNA_4882 0.65 0.8
1,216,479 - 13250 mRNA_4882 0.65 0.7
1,216,511 + 13250 mRNA_4882 0.68 0.2
1,216,513 - 13250 mRNA_4882 0.68 -0.4
1,216,516 - 13250 mRNA_4882 0.68 -0.4
1,216,631 + 13250 mRNA_4882 0.79 0.8
1,216,648 + 13250 mRNA_4882 0.80 -0.7
1,216,898 - 0.6
1,217,082 - 0.8
1,217,083 - -0.2
1,217,088 - -0.7
1,217,088 + 0.6
1,217,799 + 1.3
1,217,817 + -0.3
1,217,832 + 0.0