Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4645

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4644: 13012 - Hypothetical Protein, at 679484 to 680110 13012 mRNA_4645: 13013 - Hypothetical Protein, at 680533 to 681409 13013 mRNA_4646: 13014 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 681473 to 684221 13014

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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679,892 - 13012 mRNA_4644 0.65 1.0
679,921 - 13012 mRNA_4644 0.70 -0.5
680,042 - 13012 mRNA_4644 0.89 -0.4
680,176 - -0.4
680,199 - 0.3
680,221 - 0.3
680,225 + -0.2
680,227 - 2.3
680,233 + -0.8
680,258 - 0.7
680,349 + 1.3
680,351 - -0.8
680,363 - 0.8
680,366 + 1.4
680,368 + -2.0
680,369 - -0.5
680,376 + 0.8
680,418 + -1.7
680,544 + -0.2
680,551 + 0.3
680,571 - -0.2
680,625 + 13013 mRNA_4645 0.10 -0.8
681,257 + 13013 mRNA_4645 0.83 -0.6
681,850 + 13014 mRNA_4646 0.14 -1.0
681,994 - 13014 mRNA_4646 0.19 0.5
682,137 + 13014 mRNA_4646 0.24 0.0
682,163 - 13014 mRNA_4646 0.25 1.0
682,167 + 13014 mRNA_4646 0.25 0.0
682,291 - 13014 mRNA_4646 0.30 0.4
682,398 - 13014 mRNA_4646 0.34 0.7