Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4452

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4451: 12819 - K03355 APC8, CDC23 anaphase-promoting complex subunit 8, at 214508 to 216794 12819 mRNA_4452: 12820 - K13955 yogA zinc-binding alcohol dehydrogenase/oxidoreductase, at 217165 to 218716 12820 mRNA_4453: 12821 - KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis, at 218886 to 222303 12821

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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216,862 - 2.3
216,889 + 0.1
216,986 + 0.1
216,997 - -0.5
217,001 - -0.8
217,018 + -0.0
217,026 - -1.6
217,032 + -0.7
217,036 - 0.0
217,192 - -0.2
217,214 + 0.2
217,303 + -0.1
217,331 - 12820 mRNA_4452 0.11 0.0
217,812 + 12820 mRNA_4452 0.42 0.2
218,406 + 12820 mRNA_4452 0.80 0.5
218,420 - 12820 mRNA_4452 0.81 -0.2
218,434 - 12820 mRNA_4452 0.82 0.3
218,507 + 12820 mRNA_4452 0.86 -0.0
218,759 + -0.4
218,760 - -0.5
218,846 - -0.9
218,904 + 0.6
218,991 + 0.7
219,051 - -0.2
219,197 + 0.2
219,258 - 12821 mRNA_4453 0.11 -1.2
219,332 + 12821 mRNA_4453 0.13 -0.2
219,494 + 12821 mRNA_4453 0.18 0.5
219,497 - 12821 mRNA_4453 0.18 0.5
219,630 - 12821 mRNA_4453 0.22 0.4
219,646 - 12821 mRNA_4453 0.22 -0.4