Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4375

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4374: 12742 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 43132 to 46033 12742 mRNA_4375: 12743 - K14209 SLC36A, PAT solute carrier family 36 (proton-coupled amino acid transporter), at 46350 to 49394 12743 mRNA_4376: 12744 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 49826 to 51100 12744

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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45,445 + 12742 mRNA_4374 0.80 -0.3
45,452 - 12742 mRNA_4374 0.80 -1.3
45,462 + 12742 mRNA_4374 0.80 -2.0
45,471 - 12742 mRNA_4374 0.81 -0.6
45,741 - 12742 mRNA_4374 0.90 -1.0
45,744 - 0.7
45,744 + -0.6
45,773 + 0.3
45,906 + 0.2
45,912 - -0.0
45,918 - 0.2
45,996 - -1.5
46,018 + 0.9
46,034 - 1.0
46,055 - -1.0
46,059 + 0.3
46,060 + 0.8
46,074 + 0.4
46,155 - 1.4
46,186 + -1.0
46,189 - 0.0
46,191 + -0.2
46,192 + 0.3
46,195 - 1.0
46,201 + -0.0
46,202 + 0.1
46,203 - -1.1
46,205 + 0.8
46,208 - 0.1
46,208 - 0.3
46,217 + 2.1
46,217 + 0.3
46,219 - 0.2
46,227 - -1.2
46,230 + -0.5
46,233 + 0.4
46,235 + 0.1
46,237 - -0.2
46,237 + 0.1
46,287 + 0.1
46,334 + 0.2
46,342 - 0.1
46,346 + 0.4
46,355 + 0.6
46,355 - 0.3
46,367 + 0.9
46,367 + 0.0
46,367 - 1.0
46,368 - 1.6
46,369 - -1.1
46,383 - 0.4
46,384 + 0.7
46,387 + -0.5
46,623 - 1.1
46,759 + 12743 mRNA_4375 0.13 0.1
46,940 - 12743 mRNA_4375 0.19 0.2
46,947 - 12743 mRNA_4375 0.20 0.3
46,956 + 12743 mRNA_4375 0.20 -0.3
46,976 + 12743 mRNA_4375 0.21 0.4
47,119 + 12743 mRNA_4375 0.25 -0.1
47,155 - 12743 mRNA_4375 0.26 0.9
47,579 + 12743 mRNA_4375 0.40 0.6
47,664 + 12743 mRNA_4375 0.43 -0.1
47,758 + 12743 mRNA_4375 0.46 -0.5
47,837 - 12743 mRNA_4375 0.49 1.0
47,956 + 12743 mRNA_4375 0.53 1.9
48,013 + 12743 mRNA_4375 0.55 0.6
48,024 - 12743 mRNA_4375 0.55 0.6
48,445 + 12743 mRNA_4375 0.69 0.3
48,715 - 12743 mRNA_4375 0.78 0.5
48,716 - 12743 mRNA_4375 0.78 0.7
48,905 + 12743 mRNA_4375 0.84 -0.2
49,014 + 12743 mRNA_4375 0.87 0.2
49,028 - 12743 mRNA_4375 0.88 -0.8
49,176 + -0.0
49,334 - 1.4
49,348 + 0.6
49,351 - 0.3
49,397 - 0.4
49,415 - 0.5
49,433 - -1.9
49,446 - -0.1
49,628 - 1.1
49,747 - 0.7
49,901 + -0.1
50,136 + 12744 mRNA_4376 0.24 0.5
50,139 - 12744 mRNA_4376 0.25 1.9