Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4369

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4369: 12737 - K03671 trxA thioredoxin 1, at 29253 to 29815 12737 mRNA_4370: 12738 - HMMPfam-Purine nucleoside permease (NUP)-PF06516,PIRSF--PIRSF013171, at 30221 to 32027 12738

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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28,357 - 1.5
28,362 + -0.3
28,481 + 0.0
28,533 + 2.1
28,680 + 1.2
28,784 - 0.6
28,862 - -0.1
28,867 + -0.1
28,867 + -0.2
28,870 - -0.1
28,878 - 0.3
29,035 - -0.2
29,094 + 0.7
29,103 + 0.6
29,218 - 1.1
29,668 - 12737 mRNA_4369 0.74 -0.5
29,839 + 0.6
30,499 - 12738 mRNA_4370 0.15 0.5
30,508 - 12738 mRNA_4370 0.16 -0.9