Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4277

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4277: 12645 - K08773 RALBP1 RalA-binding protein 1, at 1781078 to 1785287 12645 mRNA_4278: 12646 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1786017 to 1788218 12646

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,780,089 - 0.7
1,780,117 + 0.6
1,780,380 - 0.4
1,780,433 - 0.1
1,780,810 + -0.1
1,781,371 - -0.3
1,781,397 - -0.4
1,781,670 + 12645 mRNA_4277 0.14 0.0
1,781,854 + 12645 mRNA_4277 0.18 0.3
1,781,916 + 12645 mRNA_4277 0.20 -1.6
1,782,213 + 12645 mRNA_4277 0.27 0.4
1,782,386 - 12645 mRNA_4277 0.31 0.8
1,782,577 - 12645 mRNA_4277 0.36 1.7
1,782,728 + 12645 mRNA_4277 0.39 0.3
1,782,863 + 12645 mRNA_4277 0.42 -1.1
1,782,968 - 12645 mRNA_4277 0.45 -0.8
1,783,016 + 12645 mRNA_4277 0.46 -1.0
1,783,252 - 12645 mRNA_4277 0.52 -1.9
1,783,289 - 12645 mRNA_4277 0.53 0.1
1,783,447 + 12645 mRNA_4277 0.56 -1.3
1,783,593 - 12645 mRNA_4277 0.60 0.8
1,783,803 - 12645 mRNA_4277 0.65 0.2
1,783,905 + 12645 mRNA_4277 0.67 -1.3
1,784,446 + 12645 mRNA_4277 0.80 -0.1
1,784,508 + 12645 mRNA_4277 0.81 -0.4
1,784,595 + 12645 mRNA_4277 0.84 -0.8
1,784,755 - 12645 mRNA_4277 0.87 0.3
1,784,770 + 12645 mRNA_4277 0.88 -1.8
1,785,010 - -0.6
1,785,051 + -0.1
1,785,217 + 1.2
1,785,290 - 0.3
1,785,345 - 0.0
1,785,357 + -0.9
1,785,491 + -0.6
1,785,629 - -0.4
1,785,629 - -0.1
1,785,639 + -0.6
1,785,651 + -0.1
1,785,889 + 0.1
1,785,921 - 0.7
1,785,929 - -0.3
1,786,089 + -0.0
1,786,110 - -0.7