Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4257

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4256: 12624 - HMMPfam-Putative serine esterase (DUF676)-PF05057,SUPERFAMILY--SSF53474, at 1723590 to 1725479 12624 mRNA_4257: 12625 - K00295 MTD1 methylenetetrahydrofolate dehydrogenase (NAD+), at 1725575 to 1726851 12625 mRNA_4258: 12626 - KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily), at 1727283 to 1728545 12626

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,724,598 - 12624 mRNA_4256 0.53 -0.4
1,724,600 + 12624 mRNA_4256 0.53 -0.3
1,724,615 - 12624 mRNA_4256 0.54 1.1
1,724,637 - 12624 mRNA_4256 0.55 0.4
1,724,909 + 12624 mRNA_4256 0.70 0.5
1,725,056 + 12624 mRNA_4256 0.78 0.6
1,725,067 + 12624 mRNA_4256 0.78 0.1
1,725,170 - 12624 mRNA_4256 0.84 0.6
1,725,181 + 12624 mRNA_4256 0.84 0.4
1,725,486 + 0.2
1,725,588 - 0.8
1,725,615 + 1.3
1,725,745 - 12625 mRNA_4257 0.13 -0.6
1,726,011 + 12625 mRNA_4257 0.34 0.4
1,726,324 - 12625 mRNA_4257 0.59 0.2
1,726,328 + 12625 mRNA_4257 0.59 1.0
1,726,358 - 12625 mRNA_4257 0.61 -0.8
1,726,643 - 12625 mRNA_4257 0.84 1.3
1,726,661 + 12625 mRNA_4257 0.85 0.6
1,726,781 - 0.6
1,727,068 - -0.1
1,727,072 + -1.2
1,727,199 - -2.4
1,727,206 + 1.8
1,727,209 - 0.2
1,727,211 - 0.4
1,727,214 + 1.5
1,727,215 - 0.5
1,727,218 - 0.3
1,727,227 + -0.0
1,727,231 + 2.4
1,727,232 + 0.8
1,727,238 + -1.8
1,727,312 - -0.0
1,727,322 - 1.1
1,727,323 + 0.8
1,727,327 + -1.2
1,727,337 + 0.5
1,727,337 - -0.6
1,727,347 + -0.9
1,727,360 - -2.4
1,727,519 + 12626 mRNA_4258 0.19 0.7
1,727,757 - 12626 mRNA_4258 0.38 0.5
1,727,803 + 12626 mRNA_4258 0.41 0.5