Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4055

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4054: 12422 - KOG2973 Uncharacterized conserved protein, at 1248233 to 1250054 12422 mRNA_4055: 12423 - HMMPfam-Glyoxalase-like domain-PF12681,SUPERFAMILY--SSF54593, at 1250163 to 1250733 12423 mRNA_4056: 12424 - BLAST tRNA(His) guanylyltransferase [Kwoniella heveanensis ..., at 1250945 to 1252332 12424

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,250,276 + 12423 mRNA_4055 0.20 -0.8
1,250,320 - 12423 mRNA_4055 0.27 -0.6
1,250,594 - 12423 mRNA_4055 0.75 -0.1
1,250,622 + 12423 mRNA_4055 0.80 0.0
1,250,623 - 12423 mRNA_4055 0.81 0.3
1,250,623 - 12423 mRNA_4055 0.81 0.3
1,250,895 - 0.6
1,250,898 - 0.1
1,250,898 + -1.3
1,251,039 - -0.5
1,251,047 - 0.9
1,251,054 + 0.1
1,251,065 + -0.6
1,251,074 - -0.0
1,251,365 + 12424 mRNA_4056 0.30 0.1
1,251,666 - 12424 mRNA_4056 0.52 -0.4
1,251,720 - 12424 mRNA_4056 0.56 0.6