Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4046

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4045: 12413 - Hypothetical Protein, at 1226849 to 1229104 12413 mRNA_4046: 12414 - HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452, at 1229345 to 1230784 12414

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,229,004 + 0.7
1,229,282 + -0.4
1,229,406 - 0.1
1,229,453 + -0.9
1,229,511 - 12414 mRNA_4046 0.12 -0.1
1,229,710 - 12414 mRNA_4046 0.25 -1.9
1,229,727 + 12414 mRNA_4046 0.27 0.2
1,229,730 - 12414 mRNA_4046 0.27 0.5
1,229,743 + 12414 mRNA_4046 0.28 1.7
1,229,749 + 12414 mRNA_4046 0.28 -0.9
1,229,853 - 12414 mRNA_4046 0.35 -0.4
1,229,870 + 12414 mRNA_4046 0.36 0.7
1,229,871 + 12414 mRNA_4046 0.37 0.1
1,229,873 + 12414 mRNA_4046 0.37 -0.4
1,229,882 + 12414 mRNA_4046 0.37 -0.8
1,229,883 + 12414 mRNA_4046 0.37 0.3
1,229,885 - 12414 mRNA_4046 0.38 0.1
1,229,888 - 12414 mRNA_4046 0.38 1.1
1,229,905 - 12414 mRNA_4046 0.39 -0.1
1,229,910 + 12414 mRNA_4046 0.39 0.4
1,229,914 + 12414 mRNA_4046 0.40 1.2
1,229,917 + 12414 mRNA_4046 0.40 -0.4
1,229,924 + 12414 mRNA_4046 0.40 0.5
1,229,925 + 12414 mRNA_4046 0.40 -0.2
1,229,933 - 12414 mRNA_4046 0.41 -0.2
1,229,939 - 12414 mRNA_4046 0.41 0.6
1,230,060 - 12414 mRNA_4046 0.50 -0.0
1,230,062 - 12414 mRNA_4046 0.50 0.3
1,230,063 + 12414 mRNA_4046 0.50 0.8
1,230,083 + 12414 mRNA_4046 0.51 -1.0
1,230,209 + 12414 mRNA_4046 0.60 0.4
1,230,215 + 12414 mRNA_4046 0.60 0.9
1,230,763 - 0.6
1,230,777 + -0.6
1,230,829 - -0.4
1,230,916 + -0.4
1,230,922 + 0.4
1,230,981 - 0.3
1,231,197 + -1.0
1,231,326 - 1.2
1,231,367 - -0.1
1,231,369 + -1.0
1,231,650 - -3.1
1,231,657 + 0.3
1,231,657 + -2.1