Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3833

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3832: 12200 - Hypothetical Protein, at 690949 to 691867 12200 mRNA_3833: 12201 - K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit, at 692168 to 694484 12201 mRNA_3834: 12202 - Hypothetical Protein, at 695407 to 697402 12202

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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691,193 - 12200 mRNA_3832 0.27 -0.5
691,202 + 12200 mRNA_3832 0.28 0.2
691,813 + -0.4
691,917 - -0.5
691,919 - -0.4
691,927 + -0.6
691,928 - -0.1
691,936 + -0.4
691,949 - 0.9
691,973 - -1.6
691,996 - 0.6
692,113 + -0.3
692,205 - 0.0
692,399 + 1.0
692,401 + 12201 mRNA_3833 0.10 1.5
692,403 - 12201 mRNA_3833 0.10 0.4
694,855 - 0.7
694,876 + -0.9
694,992 - 1.3
695,007 - -0.3
695,036 + -0.2
695,141 - 0.0
695,154 + 0.7
695,213 + 1.1