Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3822

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3821: 12189 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 665422 to 669105 12189 mRNA_3822: 12190 - HMMPfam-Protein of unknown function (DUF2781)-PF10914,PIRSF--PIRSF031032, at 669228 to 670038 12190 mRNA_3823: 12191 - Hypothetical Protein, at 670135 to 670720 12191 mRNA_3824: 12192 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 670766 to 671114 12192

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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668,372 + 12189 mRNA_3821 0.80 -0.0
668,374 + 12189 mRNA_3821 0.80 -0.6
668,474 + 12189 mRNA_3821 0.83 0.4
668,554 - 12189 mRNA_3821 0.85 0.2
668,713 + 12189 mRNA_3821 0.89 -0.4
668,863 + -0.3
668,988 - -1.9
669,009 - -1.2
669,050 + -0.0
669,176 + 0.3
669,178 - 1.9
669,187 - -1.2
669,188 - -1.1
669,197 - 0.8
669,289 + -1.0
669,945 + 12190 mRNA_3822 0.88 -0.8
669,993 - -0.2
670,220 - 12191 mRNA_3823 0.15 -0.9
671,029 - 12192 mRNA_3824 0.75 0.7