Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3744

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3744: 12112 - KOG0955 PHD finger protein BR140/LIN-49, at 479560 to 485967 12112 mRNA_3745: 12113 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 486209 to 486880 12113

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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478,589 + -0.7
478,592 + -0.1
478,594 - 0.8
478,603 + 0.3
478,606 - -0.1
478,645 - -0.8
478,764 - -2.3
478,764 + 0.6
478,772 + 0.2
478,772 + -0.2
478,785 - 0.0
478,882 - -0.3
478,899 - -0.5
478,899 - 0.4
478,899 - -0.5
478,899 - 0.3
478,904 + 0.5
478,908 + -0.6
478,908 + 0.6
478,935 + -0.1
478,943 + 0.6
479,380 + 0.3
479,504 + 0.3
479,511 + -0.3
479,521 + 2.2
479,532 - 1.0
479,680 - -0.3
479,708 + 0.3
479,821 + -0.6
479,835 - 2.1
479,977 + -0.4
479,997 + 0.2
480,102 + 0.3
480,143 - -0.5
480,565 - 12112 mRNA_3744 0.16 0.7
480,716 - 12112 mRNA_3744 0.18 -1.1
480,998 - 12112 mRNA_3744 0.22 0.0
481,288 + 12112 mRNA_3744 0.27 -0.3
481,304 - 12112 mRNA_3744 0.27 0.5
481,307 + 12112 mRNA_3744 0.27 0.6
481,403 - 12112 mRNA_3744 0.29 1.0
481,720 - 12112 mRNA_3744 0.34 0.3
481,861 - 12112 mRNA_3744 0.36 -0.7
482,159 - 12112 mRNA_3744 0.41 1.4
482,457 - 12112 mRNA_3744 0.45 0.8
482,457 + 12112 mRNA_3744 0.45 0.7
482,618 - 12112 mRNA_3744 0.48 -0.1
482,730 + 12112 mRNA_3744 0.49 0.5
482,771 - 12112 mRNA_3744 0.50 1.2
482,777 + 12112 mRNA_3744 0.50 0.4
482,791 - 12112 mRNA_3744 0.50 -0.0
482,913 - 12112 mRNA_3744 0.52 0.1
482,933 + 12112 mRNA_3744 0.53 0.8
483,048 - 12112 mRNA_3744 0.54 -0.0
483,062 - 12112 mRNA_3744 0.55 0.4
483,063 + 12112 mRNA_3744 0.55 1.0
483,068 - 12112 mRNA_3744 0.55 0.9
483,108 + 12112 mRNA_3744 0.55 0.3
483,796 + 12112 mRNA_3744 0.66 0.7
483,798 - 12112 mRNA_3744 0.66 0.7
483,840 + 12112 mRNA_3744 0.67 -0.6
483,961 - 12112 mRNA_3744 0.69 0.6
483,981 - 12112 mRNA_3744 0.69 0.9
484,243 - 12112 mRNA_3744 0.73 0.7
484,273 - 12112 mRNA_3744 0.74 0.8
484,379 - 12112 mRNA_3744 0.75 0.9
484,413 - 12112 mRNA_3744 0.76 0.8
484,428 - 12112 mRNA_3744 0.76 0.6
484,431 - 12112 mRNA_3744 0.76 0.7
484,432 - 12112 mRNA_3744 0.76 -0.4
484,432 - 12112 mRNA_3744 0.76 0.1
484,433 - 12112 mRNA_3744 0.76 0.7
484,434 - 12112 mRNA_3744 0.76 1.6
484,438 - 12112 mRNA_3744 0.76 1.0
484,441 - 12112 mRNA_3744 0.76 0.3
484,444 - 12112 mRNA_3744 0.76 0.8
484,444 - 12112 mRNA_3744 0.76 0.1
484,444 - 12112 mRNA_3744 0.76 0.2
484,445 + 12112 mRNA_3744 0.76 0.9
484,445 + 12112 mRNA_3744 0.76 -0.6
484,446 + 12112 mRNA_3744 0.76 -1.0
484,448 + 12112 mRNA_3744 0.76 0.6
484,451 + 12112 mRNA_3744 0.76 1.4
484,453 + 12112 mRNA_3744 0.76 -0.2
484,457 + 12112 mRNA_3744 0.76 0.9
484,457 + 12112 mRNA_3744 0.76 1.0
484,458 + 12112 mRNA_3744 0.76 1.0
484,459 + 12112 mRNA_3744 0.76 0.7
484,461 + 12112 mRNA_3744 0.76 0.8
484,463 + 12112 mRNA_3744 0.77 0.6
484,468 + 12112 mRNA_3744 0.77 0.8
484,468 + 12112 mRNA_3744 0.77 0.7
484,473 + 12112 mRNA_3744 0.77 -0.9
484,477 + 12112 mRNA_3744 0.77 0.1
484,591 + 12112 mRNA_3744 0.79 -0.8
484,595 + 12112 mRNA_3744 0.79 0.3
484,608 + 12112 mRNA_3744 0.79 0.3
484,688 + 12112 mRNA_3744 0.80 0.3
484,774 + 12112 mRNA_3744 0.81 1.0
484,811 + 12112 mRNA_3744 0.82 0.3
484,988 + 12112 mRNA_3744 0.85 0.4
485,139 + 12112 mRNA_3744 0.87 -0.5
485,154 - 12112 mRNA_3744 0.87 -0.1
485,451 + 0.2
485,460 + 1.6
485,872 - 0.5
485,895 + -2.5
485,901 + 1.1
486,072 - -0.8
486,346 - 12113 mRNA_3745 0.20 -0.0
486,937 - 0.6
486,965 + 0.6