Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3585

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104607 to 106241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106973 to 108703 11953

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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106,048 - 11952 mRNA_3584 0.88 0.6
106,160 - -0.0
106,325 - -0.6
106,343 - 0.1
106,344 - -1.6
106,348 + -0.3
106,352 - 1.6
106,359 + -0.6
106,362 + -1.9
106,362 + -0.5
106,373 - 0.8
106,379 + 0.2
106,380 + 0.0
106,388 + -0.0
106,397 + 0.6
106,400 - 0.7
106,412 + -0.3
106,412 - 0.3
106,416 + 0.3
106,417 + -0.3
106,441 - 0.5
106,445 + -0.1
106,459 - -0.2
106,489 + -0.3
106,490 - 0.2
106,500 - -0.6
106,505 - -0.1
106,507 + 0.3
106,511 - 0.5
106,519 + 0.8
106,541 - -0.7
106,542 + -0.1
106,555 + -0.5
106,654 + 1.5
106,799 - 0.6
106,808 - 0.3
106,822 + 0.4
107,061 - 0.7
107,107 + 0.1
107,365 - 11953 mRNA_3585 0.23 -0.0
108,019 + 11953 mRNA_3585 0.60 -0.4
108,816 - 0.1
108,824 + 0.5
108,860 - 0.1
109,033 + -0.8
109,088 + 0.3
109,101 - 0.5
109,112 - 0.1
109,132 - 1.1
109,191 + 0.7
109,232 + -0.7
109,253 - -0.6
109,262 - 0.1
109,360 + 0.2
109,398 - 1.8
109,398 + 0.7
109,403 + 0.2
109,410 - -1.0
109,414 + -0.1
109,432 - 1.4
109,468 - 0.1
109,470 - -1.3
109,477 + 1.1
109,547 + 0.5
109,567 + 1.1
109,574 - -0.1
109,577 + 0.1
109,585 - 1.0
109,586 - -0.3
109,623 - 0.2
109,646 + -0.6
109,666 - 0.8