Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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2 + -1.0
2 + 0.3
2 + -1.6
2 + -0.0
2 + 0.4
2 + 0.5
2 + 1.1
14 + 0.1
26 + -0.1
36 + 0.5
39 + 0.4
42 - 0.6
50 + 0.1
50 + 0.9
50 + 0.5
53 - 0.7
57 + 0.2
59 - -0.0
103 + -0.4
104 + -0.9
112 + -0.7
117 - -0.6
120 - 0.7
140 - 0.6
141 + 0.3
146 + 0.0
150 + -0.8
199 - 11905 mRNA_3537 0.12 0.3
200 + 11905 mRNA_3537 0.12 -0.4
200 - 11905 mRNA_3537 0.12 -0.1
200 - 11905 mRNA_3537 0.12 -0.2
200 - 11905 mRNA_3537 0.12 -1.5
201 - 11905 mRNA_3537 0.12 -0.9
207 + 11905 mRNA_3537 0.13 0.6
207 + 11905 mRNA_3537 0.13 -0.4
207 + 11905 mRNA_3537 0.13 -1.3
209 + 11905 mRNA_3537 0.13 0.6
210 + 11905 mRNA_3537 0.13 -0.7
213 + 11905 mRNA_3537 0.14 -0.1
213 + 11905 mRNA_3537 0.14 0.1
214 + 11905 mRNA_3537 0.14 -0.3
214 + 11905 mRNA_3537 0.14 0.0
218 + 11905 mRNA_3537 0.14 1.0
221 + 11905 mRNA_3537 0.15 -0.1
222 + 11905 mRNA_3537 0.15 -0.4
222 + 11905 mRNA_3537 0.15 0.1
222 + 11905 mRNA_3537 0.15 -2.1
223 - 11905 mRNA_3537 0.15 -0.5
225 - 11905 mRNA_3537 0.15 -1.6
227 - 11905 mRNA_3537 0.15 -1.8
227 + 11905 mRNA_3537 0.15 -0.6
230 + 11905 mRNA_3537 0.16 1.4
230 + 11905 mRNA_3537 0.16 0.6
246 - 11905 mRNA_3537 0.18 -0.2
246 - 11905 mRNA_3537 0.18 -0.7
251 + 11905 mRNA_3537 0.18 -0.2
252 + 11905 mRNA_3537 0.18 1.3
260 + 11905 mRNA_3537 0.19 0.3
262 + 11905 mRNA_3537 0.20 -0.3
265 - 11905 mRNA_3537 0.20 0.8
272 - 11905 mRNA_3537 0.21 -0.2
274 + 11905 mRNA_3537 0.21 -2.3
325 - 11905 mRNA_3537 0.27 -0.6
326 - 11905 mRNA_3537 0.27 0.0
341 + 11905 mRNA_3537 0.29 0.3
359 + 11905 mRNA_3537 0.31 0.4
362 + 11905 mRNA_3537 0.32 0.1
367 - 11905 mRNA_3537 0.32 0.4
368 + 11905 mRNA_3537 0.33 -0.6
368 + 11905 mRNA_3537 0.33 -0.0
368 + 11905 mRNA_3537 0.33 1.0
373 + 11905 mRNA_3537 0.33 -1.9
373 - 11905 mRNA_3537 0.33 0.3
373 - 11905 mRNA_3537 0.33 0.2
379 + 11905 mRNA_3537 0.34 0.2
380 + 11905 mRNA_3537 0.34 -0.0
417 + 11905 mRNA_3537 0.39 0.5
452 + 11905 mRNA_3537 0.43 -2.6
472 + 11905 mRNA_3537 0.45 0.2
484 + 11905 mRNA_3537 0.47 0.2
489 - 11905 mRNA_3537 0.47 0.1
503 - 11905 mRNA_3537 0.49 0.6
511 + 11905 mRNA_3537 0.50 -0.7
518 + 11905 mRNA_3537 0.51 0.6
523 + 11905 mRNA_3537 0.52 0.0
533 + 11905 mRNA_3537 0.53 0.5
539 + 11905 mRNA_3537 0.54 -0.5
550 + 11905 mRNA_3537 0.55 0.2
579 + 11905 mRNA_3537 0.58 -0.2
638 - 11905 mRNA_3537 0.66 -2.8
640 - 11905 mRNA_3537 0.66 0.5
657 + 11905 mRNA_3537 0.68 0.1
762 - 11905 mRNA_3537 0.81 -0.6
768 + 11905 mRNA_3537 0.82 -0.2
791 - 11905 mRNA_3537 0.84 0.9
801 + 11905 mRNA_3537 0.86 1.3
804 + 11905 mRNA_3537 0.86 0.4
822 + 11905 mRNA_3537 0.88 1.6
827 + 11905 mRNA_3537 0.89 0.6
842 + 0.8
842 + 0.0
845 - 0.4
962 - -0.8
990 + -0.0
1,074 + 2.2
1,080 - 0.3
1,107 + -0.5
1,110 - -1.5
1,123 + -0.2
1,143 + 0.7
1,256 - 0.1
1,278 + -2.5
1,336 + 0.2
1,371 - 1.2
1,404 - -0.4
1,429 + -0.0
1,450 + 1.3
1,528 + -1.4
1,550 + 0.1
1,647 - 0.4
1,653 + -0.4
1,661 - -0.4
1,663 + 0.4
1,719 + 0.3
1,720 + 0.2
1,760 + 0.8
1,814 - -0.3
1,902 - -0.7