Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3462

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154218 to 156143 11829 mRNA_3462: 11830 - K17978 NUM1 nuclear migration protein NUM1, at 156661 to 162747 11830 mRNA_3463: 11831 - Hypothetical Protein, at 163497 to 164279 11831

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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155,765 + 11829 mRNA_3461 0.80 0.4
155,847 - 11829 mRNA_3461 0.85 1.8
156,002 + 0.5
156,017 + -1.4
156,019 - 0.2
156,054 + -0.4
156,226 - -0.6
156,308 + 0.2
156,316 - 0.6
156,317 + 0.4
156,320 + 0.3
156,476 + 0.0
159,455 + 11830 mRNA_3462 0.46 0.0
160,790 + 11830 mRNA_3462 0.68 0.2
162,273 - 1.9
162,281 + 0.1
162,963 + -0.5
163,104 - -1.5
163,108 - -0.3
163,122 - -0.4
163,243 - -0.5
163,265 - -1.2
163,270 - 0.1
163,270 - 0.0
163,272 + 1.3
163,274 - 0.2
163,274 + 0.3
163,275 + 1.0
163,419 - 0.5
163,422 + -1.1
163,437 + 0.4
163,440 + 0.0
163,560 + -0.6
163,566 + 0.4
163,606 - 11831 mRNA_3463 0.14 0.3
163,714 - 11831 mRNA_3463 0.28 -0.4
163,725 - 11831 mRNA_3463 0.29 1.0