Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3461

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151624 to 153827 11828 mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154218 to 156143 11829 mRNA_3462: 11830 - K17978 NUM1 nuclear migration protein NUM1, at 156661 to 162747 11830

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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153,331 - 11828 mRNA_3460 0.77 -0.9
153,332 + 11828 mRNA_3460 0.77 -0.1
153,334 + 11828 mRNA_3460 0.78 0.1
153,344 - 11828 mRNA_3460 0.78 0.4
153,345 - 11828 mRNA_3460 0.78 0.3
153,477 + 11828 mRNA_3460 0.84 -0.8
153,517 + 11828 mRNA_3460 0.86 -0.0
153,525 + 11828 mRNA_3460 0.86 -1.2
153,646 + -0.1
153,753 - 0.3
153,775 - 0.7
153,793 - -0.7
153,801 - 0.3
153,808 - -0.6
153,909 - 0.4
153,916 + -0.3
153,939 - 0.0
154,078 + -0.4
154,215 + 0.0
154,351 - -1.2
154,369 - -0.4
154,376 + -0.6
154,963 + 11829 mRNA_3461 0.39 0.9
155,158 - 11829 mRNA_3461 0.49 0.1
155,303 - 11829 mRNA_3461 0.56 0.1
155,431 - 11829 mRNA_3461 0.63 -1.8
155,765 + 11829 mRNA_3461 0.80 0.4
155,847 - 11829 mRNA_3461 0.85 1.8
156,002 + 0.5
156,017 + -1.4
156,019 - 0.2
156,054 + -0.4
156,226 - -0.6
156,308 + 0.2
156,316 - 0.6
156,317 + 0.4
156,320 + 0.3
156,476 + 0.0